Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1960 ATGGCCTCTTCAGATCCACCCTCCGCTATCCCCCTCCGCCGCATTCCTCCGCCCTGCTGGTCCCCCGACGAGACCCTCTCCCTCATCCATGCCTACCGCCTCAGGTGGTACTCCCTTGGCCGCGGCAACCTCAAGGCCACCCACTGGCAGGAGGTCGCCGACGCCATCTCCGCCCGATGCCCCTACGCCTCCCCTCCCAAAACCCCCATCCAGTGCCGCCACAAGATGGAGAAGCTCCGGAAGCGTTACCGCACTGAGATCCAACGCGCTAACTCCCTCCCTCTCTCTCCCTTCAACTCCTCTTGGCTCCACTTCAACCTTATGGATTCCATGGAGAAAGGCCCCAAACATGAGAATGATTCCGGTATCCATGAGGGCGTTGACCCTGAAGAGATCAAACACACTAGAAGCTTCAACAATTTGTATACGAATGGGTTTAGAATTAGAATCCCAACTATGGCTCAACCCCAACCCCAACCTCAACATGTGAATGAGAGAGTGAAGCCTAAATTGGGGAAAAAGAGGAAGAGAGATCCGGTGGTGAATGCGATTAAGGTAATGGGTGATGGGTTTGTGAGGATGGAACAAATGAAGATGGAAATGACAAGGGAGATTGAGACTATGAGGATGGAGATGGAAATGAAACGCACTCAGATGATTCTTCACTCTCAACATCGAATGCTCCAGGCTTTCGCTAAGGCGGTTTCGGATAAGAAGAATGAAGAATAA 729 0.5254 MASSDPPSAIPLRRIPPPCWSPDETLSLIHAYRLRWYSLGRGNLKATHWQEVADAISARCPYASPPKTPIQCRHKMEKLRKRYRTEIQRANSLPLSPFNSSWLHFNLMDSMEKGPKHENDSGIHEGVDPEEIKHTRSFNNLYTNGFRIRIPTMAQPQPQPQHVNERVKPKLGKKRKRDPVVNAIKVMGDGFVRMEQMKMEMTREIETMRMEMEMKRTQMILHSQHRMLQAFAKAVSDKKNEE 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1960 242 Coils Coil 73 93 - -
Lal14g1960 242 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 10 241 IPR044823 -
Lal14g1960 242 PANTHER TRANSCRIPTION FACTOR 10 241 - -
Lal14g1960 242 Gene3D - 20 85 - -
Lal14g1960 242 SMART 118neu2 27 116 IPR006578 -
Lal14g1960 242 Pfam Myb/SANT-like DNA-binding domain 18 111 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1960 Lal-Chr14 18702899 18703627 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g1960 19 111 Trihelix Transcription Factor Family AT3G14180 38.710 1.60e-17 79.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lal14g1960 Myb_DNA-bind_4 6.3e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1960 - - lang:109361965 338.961