Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1957 ATGTCGCCTTCAGTTGTCCAAGAAAACGGAAGTAGGAATAAGAGAAAATTTCGGGCTGATCCGCCTTTAGGGGAGCTGAATAAGATTATTCCTGCACCTCAACATGCATGCTTCAGTTATGAATTCTCTGCTGAGAAGTTTGAAATAAACACAGGTCACGTGCAAGCCACTGCTGGTGACCTGTGTAGTGTTAACCATGATCGTTCTGATGGATTGAAGCTTGGCCTCGGATTGTATAGTCCTGGAAGTTCATCCCAGGTCGGGCCTTGTCAATCTAAGGAAGAAGTCGAGGCAGATGAATATGATGACATTGATTGGAATGATCTCACTGAAGCCCAATTGGAAGAACTTGTCTTGAGTAATTTGGATGCCATTTTCAAGAGTGCAATTAGAGAAATTGTTGCATGTGGCTACACTGAAGAAGTTGCTACTAAGGCTGTCTCGAGGTCTGGCATATGTTATGGATGCAAAGATACCGTGTCTAATATAGTTGATAACACTCTACCATTCCTTAGGAAAGGCCAGGAAGTTGATCCTTCACGAGAGCACTATTTTGAAGATCTAGTGCAACTTGAGAAGTATATCTTGGCTGAATTGGTTTGTGTTCTTCGAGAGGTTAGGCCTTTCTTCAGTACTGGGGATGCAATGTGGTGTTTGTTAATTTGTGATATGAACGTGTCACATGCTTGTGCAATGGACGTTGGCCCTTCAAGTAGTTTAACTAGTGACGGAACTGCTGATGGCTGTTCATCTAGCCAAACAGAATTACAGTCAAAAGCAGAAACCAAAGTTCCTGAATTGAGTCTTCCAAGTCCTCGTAAATCAGTTCCTGCTGTTTCTCATAATTCTCAATCTAAGAAATCTCTTGTGACAGGAATTCCTGGTGTTAACAACTTAAAGAACTCTCAAACTATTGGTGGACCCTTTGAGAATGAGGGTGCAAATCGTGGACCTGTTTGTGTTGATAAAACATTTAGTGCTACCGGAACATCTCAATCTGAAGAGAAGTATGGGAATGTTAGGAAGGTCCATTCTGGTAGCAGCAAGAGGGACTACATTCTTCGGCAGAAATCATCTCATGTGGAAAAAAGTTATCGGACTTATGGATCTAAAGGTTCTTCAAGAGGAGGGAAGCAGAGTGGCTTAAGTGGTTTAATCTTGGATAAAAAACTTAAGTCTGTGTCGGAATCTTCTACCATCAACAAGAGTGCATCCTTACAGATAAGTAAGGCAACGGGAGTTGAAGTGACTCAAGACAATCATGGCGCTAGTTTCTCACCTAATGCTGGACTATCTGCCCCTGCTGCATTTAACCTGGATTCTGCTGCTGCTGTTTTTAGATCAATCAATACTCCATATTCAGTACATGCAGCAAATACAATACCTGCATTTAGTAGCCCCAGTTCATTATCAACCACAGATACTGATCTTTCTCTTTCGTTGTCTTCTAAAACCAAGTTGTCCACGGTGCCTGTCTACTGCAATAATGAGGCACCTAATAGTAGTCATGTGGGGATGCCGTATGACAGGTCCCTAGGGCAGTGGGTACCACAGGATAAAAAGGATGAGGTGATTTTGAAGCTGGTTCCAAGGGCAAGGGAGCTTAAAAATCAGCTTCAAGAATGGACCGAGTGGACCAATCAGAAGGTAATGCAGGCTGCTCGTCGGCTGGGTAAGGACAAGGTTGAGCTTAAGACACTAAGGCAAGAGAAAGAGGAAGTTGAACGTCTTAAGAAAGAGAAGCAATCTCTTGAGGAAAACACCATAAAGAAGCTCTCTGAGATGGAAAATGCCTTGTGTAAAGCCAGTGGACAGGTAGAGCGAGCTAATACTGCGGTCCAGAAGCTCAAGGTGGAGAATGCTGCACTGAGGAGAGAGATGGAAGCTGCAAAGCTACGAGCTGCAGAAACTGCCACAAACTGTGAAGAGGTCTCAAGGAGAGAAAGGAAAACTCAATTGCAGTTTCAGTCATGGGAAAAGCAGAAGTTCTTGCTTCAAGAAGAGCTAATGAGTGAAAAACACAAATCGGTACTGCTGCTACTGGAATCAGAGCAAGCTAAAATGCAACAGGAGCAAGTTGAGGCTAGATGGCAGCAGGAAGCAAAGGCAAAAGAAGAACTTCTCTTACAGGCTAGTTCTATAAGGAAAGAAAGAGAACAAATTGAGGAGTTAGCAAAATCCAAGGAGGATATGATCAAATCGAAAGCAGAGAAGAATCTGCAAAGGTTCAGAGATGATATCCATAAACTTGAAAAAGAAATTGCACAACTGAGACTGAAGACTGACTCTTCCAAAATTGCTGCACTGAAGATGGGCATTGATGGAAGCTATACTAGCAGATTCATTGACATGAAAAATGGCAATGCTTTAGAGGAACACCGGGCTTCTGTTATCTCAGAACTAGTTAGTGATTACTCGGAGACAGGCAGTGTGAAACGGGAAAGGGAATGCGTGATGTGCCTTTCTGAAGAGATGTCTGTTGTGTTCCTCCCATGTGCTCATCAGGTTGTTTGCACAACATGCAATGAGCTCCATGAGAAACAGGGTATGCAAGATTGTCCTTCTTGCAGGAGCCCCATCCAGCGGCGTATTCCTGCCCGTTTTACCCATATTTAA 2616 0.4323 MSPSVVQENGSRNKRKFRADPPLGELNKIIPAPQHACFSYEFSAEKFEINTGHVQATAGDLCSVNHDRSDGLKLGLGLYSPGSSSQVGPCQSKEEVEADEYDDIDWNDLTEAQLEELVLSNLDAIFKSAIREIVACGYTEEVATKAVSRSGICYGCKDTVSNIVDNTLPFLRKGQEVDPSREHYFEDLVQLEKYILAELVCVLREVRPFFSTGDAMWCLLICDMNVSHACAMDVGPSSSLTSDGTADGCSSSQTELQSKAETKVPELSLPSPRKSVPAVSHNSQSKKSLVTGIPGVNNLKNSQTIGGPFENEGANRGPVCVDKTFSATGTSQSEEKYGNVRKVHSGSSKRDYILRQKSSHVEKSYRTYGSKGSSRGGKQSGLSGLILDKKLKSVSESSTINKSASLQISKATGVEVTQDNHGASFSPNAGLSAPAAFNLDSAAAVFRSINTPYSVHAANTIPAFSSPSSLSTTDTDLSLSLSSKTKLSTVPVYCNNEAPNSSHVGMPYDRSLGQWVPQDKKDEVILKLVPRARELKNQLQEWTEWTNQKVMQAARRLGKDKVELKTLRQEKEEVERLKKEKQSLEENTIKKLSEMENALCKASGQVERANTAVQKLKVENAALRREMEAAKLRAAETATNCEEVSRRERKTQLQFQSWEKQKFLLQEELMSEKHKSVLLLLESEQAKMQQEQVEARWQQEAKAKEELLLQASSIRKEREQIEELAKSKEDMIKSKAEKNLQRFRDDIHKLEKEIAQLRLKTDSSKIAALKMGIDGSYTSRFIDMKNGNALEEHRASVISELVSDYSETGSVKRERECVMCLSEEMSVVFLPCAHQVVCTTCNELHEKQGMQDCPSCRSPIQRRIPARFTHI 871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1957 871 Coils Coil 606 640 - -
Lal14g1957 871 SUPERFAMILY RING/U-box 800 863 - -
Lal14g1957 871 ProSiteProfiles Zinc finger RING-type profile. 817 857 IPR001841 -
Lal14g1957 871 MobiDBLite consensus disorder prediction 241 261 - -
Lal14g1957 871 MobiDBLite consensus disorder prediction 1 23 - -
Lal14g1957 871 MobiDBLite consensus disorder prediction 241 293 - -
Lal14g1957 871 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 796 866 IPR013083 -
Lal14g1957 871 Coils Coil 557 594 - -
Lal14g1957 871 PANTHER OS05G0141500 PROTEIN 4 869 - -
Lal14g1957 871 Coils Coil 704 760 - -
Lal14g1957 871 MobiDBLite consensus disorder prediction 365 380 - -
Lal14g1957 871 Pfam Family of unknown function (DUF6592) 121 232 IPR046527 -
Lal14g1957 871 Pfam Zinc finger, C3HC4 type (RING finger) 814 862 - -
Lal14g1957 871 MobiDBLite consensus disorder prediction 360 381 - -
Lal14g1957 871 MobiDBLite consensus disorder prediction 275 293 - -
Lal14g1957 871 PANTHER OS05G0141500 PROTEIN 4 869 IPR046934 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1957 Lal-Chr14 18689822 18694114 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g1957 817 866 C3H Transcription Factor Family AT1G73950 42.000 9.68e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1957 - - gmx:100785921 1179.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1957 14 18689822 18694114 Lal14g1957 14 18689822 18694114 ECH
Lal14g1957 14 18689822 18694114 Lal7g1451 7 19349785 19354084 LSH
Lal14g1957 14 18689822 18694114 Lal19g1518 19 17487252 17491443 LSH
Lal14g1957 14 18689822 18694114 Lal3g0323 3 2105368 2108291 PCT
Lal3g0323 3 2105368 2108291 Lal14g1957 14 18689822 18694114 PCT