Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1956 ATGGACAATAATAATAATAATCAACAACCATCACATGCACTACCTTCCTTCACCAATAGCTTTCGCAAATTAGAAAGAGAGCACATAGAAGGAAGTGGGACGCCTTTAAGAAGCAGGACACTGCGTATTGAGTCTTGTTATTCACTTTCAAGATTTGATTTGGAGTCTTTAAACAATGAGAAGGGTGATGATGTACAGGAGTGCTCTTCTCTTCAAGATTGTTCAACAAGTATTGAATCTGAAACCCCTTGTTCCGATGCCAGCAGTTCGGATTCGGAAGATCAGCCAGATTCATATAGCAGTAGCAATATGCGCGGTTTCCTTAATTTGCTCAAGAAAGGGTCCCAAATGCCCTTCCAACCCTTTCAACCTCTTAAGAATGTTCCAAAACTCAGGAAAAAAAGCAACAGAATAAGAGAGGACCTCATTCCACCAGTGACTTCTCCAACTCTTAAACCGTCTCTAAAACCATCTCTTACCAACAATTTTTGTTGCTTTAAATCTTCCTGGAAGAATTTTACTCTTTCAGACCTCCAAGCTGCAACCGATAATTTCAGTCATGATAATTTGATTGGTGAGGGAGGTTATGCGGAGGTTTATAAAGGGAAATTGGAAGATGGAAATTTTGTTGCAATTAAAAGGTTGACAAGAGGGAACCAAGAAGAAATGACAGCAGATTTCTTGTCTGAGCTTGGTATTATAGTGCATGTGGATCATCCTAATATTGCTAGGTTGATTGGATATGGTGTTGAAGGTGGCATGCATCTTGTTCTTCAGTTATCTCCACATGGAAGCTTATCATCCATACTTTATGGAAGTCGTGAGAAACTCGATTGGAACACAAGATATAAGATTGCTTTGGGAACTGCTGAGGGCCTTCGCTATCTGCACGAGGAATGTCAAAGAAGGATTATCCACAGAGATATTAAGGCTTCTAATATATTGCTTTTGGAGAATTTTGAGCCACAGATATCTGATTTTGGCCTTGCAAAATGGTTACCTGACCAATGGAGTCACCATACTGTCTCCAAATTTGAAGGCACATTTGGATATCTTCCTCCTGAATTCTTTATGCATGGTATAGTTGATGAAAAAACTGATGTCTATGCTTATGGAGTGCTATTATTAGAGCTCATTACAGGACGACAAGCTTTGGATAGCTCACAGAAAAGTCTGGTGATGTGGGCAAAACCTCTGCTATCTACAAACAACATTAAAGAGCTTGTTGATCCATGTTTGAATGATGACTATGATGAAGATCAAATGAAATGTATAATCTTAACAGCTTCTTTGTGTATAGACCAGTCTTCAGTTCGACCCCAAATGAATCAGGCAGGTATTACAGATGTCAAGAGGTGA 1359 0.3929 MDNNNNNQQPSHALPSFTNSFRKLEREHIEGSGTPLRSRTLRIESCYSLSRFDLESLNNEKGDDVQECSSLQDCSTSIESETPCSDASSSDSEDQPDSYSSSNMRGFLNLLKKGSQMPFQPFQPLKNVPKLRKKSNRIREDLIPPVTSPTLKPSLKPSLTNNFCCFKSSWKNFTLSDLQAATDNFSHDNLIGEGGYAEVYKGKLEDGNFVAIKRLTRGNQEEMTADFLSELGIIVHVDHPNIARLIGYGVEGGMHLVLQLSPHGSLSSILYGSREKLDWNTRYKIALGTAEGLRYLHEECQRRIIHRDIKASNILLLENFEPQISDFGLAKWLPDQWSHHTVSKFEGTFGYLPPEFFMHGIVDEKTDVYAYGVLLLELITGRQALDSSQKSLVMWAKPLLSTNNIKELVDPCLNDDYDEDQMKCIILTASLCIDQSSVRPQMNQAGITDVKR 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1956 452 Pfam Protein kinase domain 187 444 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal14g1956 452 ProSitePatterns Protein kinases ATP-binding region signature. 191 213 IPR017441 GO:0005524
Lal14g1956 452 MobiDBLite consensus disorder prediction 1 35 - -
Lal14g1956 452 ProSiteProfiles Protein kinase domain profile. 185 433 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal14g1956 452 PANTHER RECEPTOR-LIKE CYTOSOLIC SERINE/THREONINE-PROTEIN KINASE RBK2 ISOFORM X1 73 444 - -
Lal14g1956 452 Gene3D Transferase(Phosphotransferase) domain 1 262 450 - -
Lal14g1956 452 SUPERFAMILY Protein kinase-like (PK-like) 166 444 IPR011009 -
Lal14g1956 452 SMART serkin_6 185 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal14g1956 452 ProSitePatterns Serine/Threonine protein kinases active-site signature. 304 316 IPR008271 GO:0004672|GO:0006468
Lal14g1956 452 MobiDBLite consensus disorder prediction 1 18 - -
Lal14g1956 452 MobiDBLite consensus disorder prediction 79 103 - -
Lal14g1956 452 PANTHER OS08G0249100 PROTEIN 73 444 - -
Lal14g1956 452 Gene3D Phosphorylase Kinase; domain 1 149 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1956 Lal-Chr14 18684129 18687648 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g1956 156 445 Receptor kinase-like Gene Family AT1G53420 40.803 5.35e-67 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Lal14g1956 Pkinase 1.2e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1956 - - lja:Lj6g3v1915960.1 602.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1956 14 18684129 18687648 Lal14g1956 14 18684129 18687648 ECH
Lal14g1956 14 18684129 18687648 Lal13g0669 13 4338713 4345975 ECH
Lal14g1956 14 18684129 18687648 Lal13g0199 13 1251729 1260840 ECH
Lal14g1956 14 18684129 18687648 Lal24g0175 24 1280119 1283480 ECH