Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1922 ATGGAGGGAATTGAAGCTAACAAGCTTAGATTGCTTTTGTTTTGTGTATTTTATCTTGCTTTGTTCCCTACCCTAAAAGCAAACGAAGATCACTTGGACCAAGTCTGGCATAGGCGAGCATTGGAAGCAAGAAAAGCAGCTCAACAAGCTTTCAGGCCAAACCCTGAAGAAGTTGTTACTGAGTTCAATAAGCACGTCAACAAGGCTCTGAATGGCTCCCATGGAATAAGGAGGGGTTTAAGGGCCAAATACAGTGGTCCATGTTTGGCCACTAATCCCATTGACCGATGCTGGAGATGTGATCCAAATTGGGAAAAGAACCGTAAAAGGCTAGCTGATTGTGTTCTTGGTTTTGCTCATGGCACCACTGGAGGCAAAGATGGCAAATTTTATGTTGTCACTGATTCTTCTGACAATGACCTTGTCACACCTAAACCAGGGACATTGAGACATGCTGTCATTCAAACCGAACCACTATGGATTATTTTTAAACAAAGTATGACCATCAAACTAAGTTCAGAACTTATAGTAACTGATAATAAGACCATAGATGCACGTGGTGCACATGTTCATATTGCTAATGGTGCACAAATCACATTGCAATATGTGAAAAATATTATCATTCATGGCCTCCACATCCATGATATAAAGAAAGGTGGTGGTGGTCTTATCAGAGACTCGTTAGACCATTATGGATACCGTTCGCAGAGCGATGGTGATGGAATGTCATTGTTTGGTGTTAGTCATGTTTGGTTAGATCATCTTTCTTTGTCCAATTGTGATGATGGTATCATTGATGTAGTTGCTGGATCAACTGCTGTTACCATCTCCAACTGTCATATGACCCGTCAAAATGATGTTATGCTATTGGGTGCAAGTGATAGCTTTTCAGGTGATCAAGTGATGCAAGTAACTGTGGCTTTCAACCATTTTGGGAAAGGATTGGTGCAGAGAATGCCAAGATGCAGATGGGGTTATGTTCATATTGTCAACAATGACTACACTCATTGGCTTATGTATGCCATTGGTGGTAGTTCACATCCCACAATACTCAGTCAAGGAAATCGATTTATTGCTCCTCTCAACCCATTTGCAAAACAGGTGACAAAGAGGGATTATGCATCTGAAAGTGAGTGGAAGAATTGGAATTGGAGATCAGAGAATGACTTGATGATGAATGGAGCATTCTTCATTGAATCAGGAAAAAGTGTTGCAACTCCTCCAAACATAGAAATCACTGCAAAGCCTGGGGCATTTGCAGCAAGTCTCACACGCTTTACAGGTCCACTAAAGTGTGTTGCTAACAAGCCATGCTGA 1317 0.4138 MEGIEANKLRLLLFCVFYLALFPTLKANEDHLDQVWHRRALEARKAAQQAFRPNPEEVVTEFNKHVNKALNGSHGIRRGLRAKYSGPCLATNPIDRCWRCDPNWEKNRKRLADCVLGFAHGTTGGKDGKFYVVTDSSDNDLVTPKPGTLRHAVIQTEPLWIIFKQSMTIKLSSELIVTDNKTIDARGAHVHIANGAQITLQYVKNIIIHGLHIHDIKKGGGGLIRDSLDHYGYRSQSDGDGMSLFGVSHVWLDHLSLSNCDDGIIDVVAGSTAVTISNCHMTRQNDVMLLGASDSFSGDQVMQVTVAFNHFGKGLVQRMPRCRWGYVHIVNNDYTHWLMYAIGGSSHPTILSQGNRFIAPLNPFAKQVTKRDYASESEWKNWNWRSENDLMMNGAFFIESGKSVATPPNIEITAKPGAFAASLTRFTGPLKCVANKPC 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1922 438 PRINTS Pollen allergen Amb family signature 114 131 IPR018082 -
Lal14g1922 438 PRINTS Pollen allergen Amb family signature 138 163 IPR018082 -
Lal14g1922 438 PRINTS Pollen allergen Amb family signature 174 190 IPR018082 -
Lal14g1922 438 PRINTS Pollen allergen Amb family signature 238 259 IPR018082 -
Lal14g1922 438 PRINTS Pollen allergen Amb family signature 318 337 IPR018082 -
Lal14g1922 438 PRINTS Pollen allergen Amb family signature 340 359 IPR018082 -
Lal14g1922 438 PRINTS Pollen allergen Amb family signature 382 406 IPR018082 -
Lal14g1922 438 SMART amb_all 166 363 IPR002022 -
Lal14g1922 438 PANTHER PECTATE LYASE 9 438 - -
Lal14g1922 438 Pfam Pectate lyase 173 357 IPR002022 -
Lal14g1922 438 Pfam Pectate lyase, N terminus 31 80 IPR007524 GO:0030570
Lal14g1922 438 PANTHER PECTATE LYASE 18-RELATED 9 438 IPR045032 GO:0030570
Lal14g1922 438 SUPERFAMILY Pectin lyase-like 92 415 IPR011050 -
Lal14g1922 438 Gene3D - 91 431 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1922 Lal-Chr14 18499005 18500855 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g1922 1 438 Polysaccharide Lyase AT5G15110 52.421 0.0 514
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1922 K01728 - gmx:100801864 692.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g1452 12 17767855 17770227 Lal14g1922 14 18499005 18500855 ECH
Lal24g1396 24 15344449 15346195 Lal14g1922 14 18499005 18500855 ECH
Lal6g0867 6 5898245 5900861 Lal14g1922 14 18499005 18500855 ECH
Lal14g1922 14 18499005 18500855 Lal14g1922 14 18499005 18500855 ECH