Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1921 ATGTTCAAGTTTGTTGTGAACAGAGGAGTGAGAACTGCTTCAACTCCACGAATCTACAACGCTTTCGCTTCTTTCAATCTCCCTCGCTATGTATCATCCTTTGCCACAGTTGATGCTGAAGGGATATCGGGTTCTAGTCCTGCTGAAGTTTTGAACTTGGGTAGGCACTGTTCAGAATGTCAATATCAACTGTTATCAAACTTATTTTGCCACGCTTCCATGACCATCACTCTGAATGTATTGTCTCCACTTTCAGTGCAGGGTAAATGGATAGGATCTTCAAACTTGAATACAATTGTGGATCCTTTAAATGGAGACTCATTTATTAAAGTTGCTGAAGTTGATGAAACAGGCATTCAGCCATTTGTTGAAAGCTTGTCCAGCTGTCCCAAACATGGTGTGCACAATCCTTTTAAGTCACCAGAGAGATATCTTATGTATGGAGATATATCTGCTAAGGCAGCTCACATGCTTTCGCTTCCTAAGGTTTCAGATTTCTTTACAAGGCTAATACAAAGAGTTTCTCCAAAGAGTTACCAGCAGGCTTATGCAGAAGTTTATGTAACTCAGAAATTTTTAGAGAATTTCTGCGGAGACCAGGTTCGTTTCCTGGCAAGGTCTTTTGCAGTACCTGGAAATCACCTTGGACAGCAAAGCCATGGTTTTCGTTGGCCATATGGTCCGGTGGCGATTATTACTCCTTTTAATTTTCCCTTAGAGATTCCAGTCCTTCAATTGATGGGTGCACTTTATATGGGCAATAAGCCAGTCCTTAAAGTTGATAGCAAGGTGAGCATTGTCATGGAGCAAATGTTGCGTCTGCTTCATACCTGTGGTTTGCCTGTTGAGGATGTTGACTTCATAAATTCTGATGGGAAGACAATGAACAAGCTTTTGCAGGAGGCAAATCCACGAATGACCCTTTTTACTGGTAGTTCAAGAGTGGCAGAGAAGTTGGCTGGCGATTTGAAGGGAAAAATTAAATTGGAAGACGCTGGATTTGACTGGAAAATACTGGGCCCTGATGTCCATCAGGAAGATTACATTGCATGGGTATGCGACCAGGATGCATATGCGTGCAGTGGTCAGAAATGCTCGGCACAATCATTGTTATTTATTCATGAGAACTGGTCTCAAACTAACTTGATATCTAAGTTGAAAGATCTTGCTGAGAGAAGAAAGCTAGAGGATCTGACAATTGGCCCAGTCCTCACCTTTACGACTGATTCAATGCTAGAACACGTGAATAAATTACTTGAGATACCTGGTTCAAAGCTGCTCTTTGGGGGTCAGCCTTTAAAGGACCATTCAATCCCATCAATTTATGGTGCTATTAAACCGACGGCTGTTTATGTTCCTCTTGATGAAATTGTGAAAGGCAAGAATTACGAGCTAGTGACAAAAGAAATATTTGGTCCTTTTCAGATTGTTACTGACTACAAGAGCAGTCAACTACCAATTGTGTTGGATGCTTTGGAAAGAATGCATGCTCATTTAACAGCTGCTGTACAAGTGATTGGAAACACAGTAAATGGCACTACTTATGCTGGTCTTAGAGCTAGGACAACGGGAGCTCCACAAAATCACTGGTTTGGACCTGCTGGGGACCCTAGGGGTGCAGGAATTGGAACACCAGAGGCTATAAAACTAGTATGGTCTTGCCACAGAGAAATTATCTATGATGTTGGGCCCGTGCCAAATAATTGGGAAATTCCTCCATCAACATGA 1728 0.4201 MFKFVVNRGVRTASTPRIYNAFASFNLPRYVSSFATVDAEGISGSSPAEVLNLGRHCSECQYQLLSNLFCHASMTITLNVLSPLSVQGKWIGSSNLNTIVDPLNGDSFIKVAEVDETGIQPFVESLSSCPKHGVHNPFKSPERYLMYGDISAKAAHMLSLPKVSDFFTRLIQRVSPKSYQQAYAEVYVTQKFLENFCGDQVRFLARSFAVPGNHLGQQSHGFRWPYGPVAIITPFNFPLEIPVLQLMGALYMGNKPVLKVDSKVSIVMEQMLRLLHTCGLPVEDVDFINSDGKTMNKLLQEANPRMTLFTGSSRVAEKLAGDLKGKIKLEDAGFDWKILGPDVHQEDYIAWVCDQDAYACSGQKCSAQSLLFIHENWSQTNLISKLKDLAERRKLEDLTIGPVLTFTTDSMLEHVNKLLEIPGSKLLFGGQPLKDHSIPSIYGAIKPTAVYVPLDEIVKGKNYELVTKEIFGPFQIVTDYKSSQLPIVLDALERMHAHLTAAVQVIGNTVNGTTYAGLRARTTGAPQNHWFGPAGDPRGAGIGTPEAIKLVWSCHREIIYDVGPVPNNWEIPPST 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1921 575 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 81 334 IPR016162 GO:0016491
Lal14g1921 575 PANTHER ALPHA-AMINOADIPIC SEMIALDEHYDE DEHYDROGENASE 31 574 IPR044638 GO:0004029
Lal14g1921 575 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 335 510 IPR016163 GO:0016620
Lal14g1921 575 PANTHER DELTA-1-PYRROLINE-5-CARBOXYLATE DEHYDROGENASE 12A1, MITOCHONDRIAL 31 574 - -
Lal14g1921 575 Pfam Aldehyde dehydrogenase family 162 483 IPR015590 GO:0016491
Lal14g1921 575 SUPERFAMILY ALDH-like 83 503 IPR016161 GO:0016491
Lal14g1921 575 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 358 369 IPR016160 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1921 Lal-Chr14 18491546 18498544 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g1921 1 575 Aldehyde Dehydrogenase Gene Family AT5G62530 74.320 0.0 908
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1921 K00294 - gmx:100806579 958.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1921 14 18491546 18498544 Lal14g1921 14 18491546 18498544 ECH
Lal14g1921 14 18491546 18498544 Lal7g1405 7 19022076 19027722 LSH