Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1920 ATGGTAGAATCACGCCTTAGGTGGTTTAGGCACGTGTCGAGATCGGTGGAAATCCCTGTAAGGAGAGTAAATCAAATGGAGAAACTTGTTAGCCAAAAAGAAGGAGTGGTTCCTTCCAAGTTGTCAGAAACTGGTCTGGCTTTAGATCCCACCCCAAATATTAATGCCAGAAATGAGGAAGACCCACAACTGCAGGATAAAGAAGCAGAAAATGTTTTACCTGGAAGTGAAGAAATAGAAACAGTAGAATCTGTTCAACAAGATGCTCCACTTGATCCAGAGAAAATAAGGCTGGGGCAAGCAGCAACAAAGGCACAGGCTGCATTCAGGGGTTACTTGGCTCGACGGGCATTTAGGGCCCTAAAAGGCATAATAAGGCTGCAAGCACTTATTCGTGGGCACCTGGTTAGGAGACAAGCTGTCGCCACATTATACTCTATGTATGGGATTGTCAAGTTACAAGCACTTGTTCGTGGAAGAAGAGTAAGACTGTCTGAAGTTGGATTTGAAATCCATGAGAAGTGCAATCTGTTGAAACCTCTGGATGGCAAACATGTCATGCCAAACGATATATCTACAAAAATTATGAAGCTGTCAGCAAATGCTTTCATCCGTAAGCTTCTTGCTTCATCTATTATAATAATGCCCCTGCATTTGCAATATGTTCCTGGTGATCCAAATTCAGTCCTGAGTTGGTTGGAGCGCTGGTCAACATCTCACTTTTGGAAACCAGTTACACAACCCAAGAAAATTCGAGACATTAAGTCTCAGAGAAAGCAAGATAACATTTCAATTGGAGAAGCTCAAGTGAGCAAGTCGAAACGTACCAACCGGAAGTTTCCTACTTCAAATTTTGACTCGGTTCCAGTGCAACCAAACCCTGAACTTGAGAAACCAAAATGGAACTTTCGGAAAATTTCAAGCCAATCCTCAGATCCTGTGCAGGAAAATCCACAAATTGAGCTTGAAAAGATTAAGCGAAACTTGAGGAAGGTTCACAACCCAGTTGTTGAGAATAATGTCCCGTCAGAAGTTGAGTCTGAGACCTCAAGGCAGTGTTTGGAAAAGGCAATGATTAACTCTGTTCATGTTGGTGTTTCAGAAGAGGGGATTATGAGTTCCAATGAGAAGATCAAGAAAGAAGCAGCATTAGCCATTTCCGGTGTTCCTGATGTAGAAGTCCCTCCTTCACTTTCGGTTAGTAAGGAGGTATCTGACACTCCTATCACTTATCAAGTGGCTGTTGAATCAAATCCCTTGACAGAGATTACAAGTAAAGATGAAAATATTTTTGATAATGAAGTAAAGAATGAGCCAAACGATTTACCAGATACTGTTTATAAAGATACAAGTTCTCACTTAACAAATGGAGATTTGAGTCACAAGGAAGATCCAACTGGCAGTGAAAACCTGAAACCAACCCGGAAAGCCTCACTTGTAGTAAAGCAGGAACGTGCAGAAAATGGTTTACAGAATAGTCCAAAATTACCGAGTTATATGGCAGCAACTGAATCTGCGAAGGCGAAGTTAAGGGCACAAGGATCTCCAAGACTTGGACAAGAGGGAAGCGAAAGAAACAACCCTGCACGGAGACAATCTCTGCCATCTTCAACTAACAGCAAAATTAGCTCGCATTCACCTAGGACACAAAGGGCAGTTGAAGTTGGTGGCAAAGGGGGGCATAAAAGTGACAAAACTGTATCATCTTCTAGAGAAGGGAATGGTAAGGTAGTTCAGGCAGAATGGAAGAGATTTGGAATGAAACGTGCTTTGCTTCCCAAACACGTAGCTGCTGTTGTGAAAACCCAAAAGGACCCTCTGAAGGCGCTTCAAATGTTCAATTCGGTTAAAGCTGAAGAAGGGTTCAAACACACGTTATCCACTTACAGGTGCATCATACAAAAGTTAGGTTTTCACTGCAACTTTCACGAAATGGAGAACCTTATTTCTGAGACTAGGATCAACATCGATAATACCATGTTAGAAGGAATATACATTGAAGCCATTAGAAGCTATGGTAGGAAAGGGAAGGTTCAGGAAGCGGTCAACACATTCGAGCGCATGGATTTCTATAATTGCGACCCATCAGTTCATTCCTACAATGCCATTATGAACATTCTCGTTGAGTATGCTTACTTCGATCAAGCACATAAATTGTACATGAGAATGAGAGATAAAGGGGTTGATTCTGATGTGTACACCTACACCATTAGGATCAAGTCCTTCTGTAGGACTATGAGGCCTTACGCTGCTTTGAGGCTCCTTCACAACATGCCTCATCCCAATGCTGTTGCATATTGCACTGTCGTTGCTGGGTTCTATGAATGTGAAGATCATGTTGAGGCACGTGAGGTGTTTGATGAAATGCTTGAACGATGTTTTTGTCCTGATGTTATGACATCGAATAAGCTTGTGCATACTCTTTGCAAGAAGGGTCTTGTTAGGGAAAGTGAGAAGATTCTTGATAAGGTTTTGAAGAGGGGTGTTTCTCCTAATTTGTTCACCTTTAATATTTTCATACAAGGGCATTGTAGAGAAGGTGCTCTTCATCAGGCTGTAAGATTATTGGCTAGTGTGTCAAGGGAGGGTTTAGCTCCTGATGTTGTTACCTATAATACGTTAATATGTGGGCTGTGTAGAAACTCCCGGGTTGTAGAAGCTGAAGGGTATTTGCATAAAATGGTTAATGATGGATTTGAGCCTGATGATTTCACATATAATAGTATTATTGATGGATATTGCAAGTCAGGGATGGTACAAGATGCAAACCGTATTTTGAAGGATGCAGTTTTTAAGGGTTTTAAGCCTGACGAGTTTACTTGTTGTTCCTTAATTAGTGGGCTATGCTTGGATGGTGATCCTGACCATGCCATGGCTGTCTTTAAGGATGCGCGAGAAAAAGGCTTAAGGCCAAGCATTGTTGTTTACAATACCTTAATTAAAGGATTATCTCAACTGGGTCTTATTTTGCCAGCTTTGCAGTTGATGCATGAGATGGCAGAAAATGGCTGCCAACCCAATATATGGACTTATAATTTAGTTATAAATGGCTTGTGCAAGATGGGTTGTCTATCTGAAGCCAATAATCTCATCAGTGATGCTATTGCCGACGGGTGCCTCCCAGACGTATTTACCTTTAATACTTTGATTGATGGCTGCTGTAAACAGTTGAAGTTAGACAGTGCAGTTGAGCTAGTAAATAGAATGTGGACTCAAGGTGTGACTCCTGATGTTATCACGTATAATACTTTGTTGAATGGGCACTGCAAGGCTGCAAAATCTGAAGAAGTAATGGAGATTTTCAAGGCAATGGCAGAGAAGGGATGTGCTCCAAACAAAATCACATACAATATTATCTTAGAAAGCCTTTGCAAAGCTAAGAAAGTAACTGAAGCAGTAAATTTACTTGGGGAAATGAAAAGCAAGGGTTTGGAACCTGATGTGGTTAGTTTTGGCACATTGATCACCGGCTTCTGTAAGATTGGGGAACTCGATGGTGCCTACAAGTTATTTAGAAGAATGGAAAAACACTATAATGTTTGTCATACAACAGCTACATATAACATCATAATTAGTGCATTTTCTGAACAGCTCAATATGAAAATGGCAGCAAAGTTATTTTCTGTGATGAAAAAAAATGGCTGTCTCCCAGACAACTATACTTATCGGGTCATGATTGATGGCTTTTGCAAAATGGGAAATGTTACTCATGGATACCATTTTCTGTTGGAAAATATTGAAATGGAGTTCATTCCATCACTGACAACATTTGGACGGGTTTTAAATTGTCTTTGCGTGGAGCACATGGTTCAGGAAGCAGTTAGTATCATCCACCTTATGGTACGAAAGGACATCGTCCCAGAGATTGTAAATACAATTTTTGAAGCTGATAAAAAGGTGGTAGCAGCACCTAAGATTGTTGTAGAAGACTTGTTAAAGAAGGGTCATATAACTTATCATGCCTATGAAGAGGGGTCAGATGATCAGCTTAACTCCTGCTCAAACCCTGAACTTGAGAAACCAAAACGGAACTTTCCGAAAATTTCAAGCCAATCCTCAGATCCTGTGCAGGAAAATCCACAAATTGAGCTTGAAAAGATTAAGCGAAACTTGAGAAAGGTTCACAACCCAGTTGTTGAGAATAATGTCCCATCAGAAGTTGAGTCTGAGACCTCAAAGCAGCATTTGGAAAAGGAAATGATTAACTCTGTTCATGTTGGTGTTTCAGAACAGGGGATTGTGAGTTCAAATGAGAAGATCAACAAACAAGCAGCATTAACCATTTTCAGTGTTCCTGATGTAGAAGTCCCTCCTACACTTTCGGTTAAGATTACAAGTAAAGATGAAAATATTTTTGATAATGAAGTAAAGAATGAGCCAAACGATTTACCAGATACTGTTTATAAAGATACAAGTTCTCACTTAACAAATGGAGATTTGAGTCACAAGGAAGATCCAACCGGCAGTGAAAACCTGAAACCAACCCGGAAAGCCTCACATGTAGTAAAGCAGGAACGTGCAGAAAATGGTTCACAGAATAGTCGAGAATTACCGAGTTATATGGCAGCAACTGAATCTGCGAAGGCGAAGTTAAGGGCACAAGGATCTCCAAGACAAGGACAAGAGGGAAGCGAAAGAAACAACCCTGCAGGGAGACAATCTCTGCCATCTTCAACTAACAGCAAAATTAGCTCGCATTCACCTAGGACACAAAGGCCAGTTGAAATTGGTGGCAAAGGGGGGCATAAAAGTGACAAAACTGTATCATCTTCTAGAGAAGGGAATGGTAAGGTAGTTCAGGCAGAATGGAAGAGGTGA 4818 0.4089 MVESRLRWFRHVSRSVEIPVRRVNQMEKLVSQKEGVVPSKLSETGLALDPTPNINARNEEDPQLQDKEAENVLPGSEEIETVESVQQDAPLDPEKIRLGQAATKAQAAFRGYLARRAFRALKGIIRLQALIRGHLVRRQAVATLYSMYGIVKLQALVRGRRVRLSEVGFEIHEKCNLLKPLDGKHVMPNDISTKIMKLSANAFIRKLLASSIIIMPLHLQYVPGDPNSVLSWLERWSTSHFWKPVTQPKKIRDIKSQRKQDNISIGEAQVSKSKRTNRKFPTSNFDSVPVQPNPELEKPKWNFRKISSQSSDPVQENPQIELEKIKRNLRKVHNPVVENNVPSEVESETSRQCLEKAMINSVHVGVSEEGIMSSNEKIKKEAALAISGVPDVEVPPSLSVSKEVSDTPITYQVAVESNPLTEITSKDENIFDNEVKNEPNDLPDTVYKDTSSHLTNGDLSHKEDPTGSENLKPTRKASLVVKQERAENGLQNSPKLPSYMAATESAKAKLRAQGSPRLGQEGSERNNPARRQSLPSSTNSKISSHSPRTQRAVEVGGKGGHKSDKTVSSSREGNGKVVQAEWKRFGMKRALLPKHVAAVVKTQKDPLKALQMFNSVKAEEGFKHTLSTYRCIIQKLGFHCNFHEMENLISETRINIDNTMLEGIYIEAIRSYGRKGKVQEAVNTFERMDFYNCDPSVHSYNAIMNILVEYAYFDQAHKLYMRMRDKGVDSDVYTYTIRIKSFCRTMRPYAALRLLHNMPHPNAVAYCTVVAGFYECEDHVEAREVFDEMLERCFCPDVMTSNKLVHTLCKKGLVRESEKILDKVLKRGVSPNLFTFNIFIQGHCREGALHQAVRLLASVSREGLAPDVVTYNTLICGLCRNSRVVEAEGYLHKMVNDGFEPDDFTYNSIIDGYCKSGMVQDANRILKDAVFKGFKPDEFTCCSLISGLCLDGDPDHAMAVFKDAREKGLRPSIVVYNTLIKGLSQLGLILPALQLMHEMAENGCQPNIWTYNLVINGLCKMGCLSEANNLISDAIADGCLPDVFTFNTLIDGCCKQLKLDSAVELVNRMWTQGVTPDVITYNTLLNGHCKAAKSEEVMEIFKAMAEKGCAPNKITYNIILESLCKAKKVTEAVNLLGEMKSKGLEPDVVSFGTLITGFCKIGELDGAYKLFRRMEKHYNVCHTTATYNIIISAFSEQLNMKMAAKLFSVMKKNGCLPDNYTYRVMIDGFCKMGNVTHGYHFLLENIEMEFIPSLTTFGRVLNCLCVEHMVQEAVSIIHLMVRKDIVPEIVNTIFEADKKVVAAPKIVVEDLLKKGHITYHAYEEGSDDQLNSCSNPELEKPKRNFPKISSQSSDPVQENPQIELEKIKRNLRKVHNPVVENNVPSEVESETSKQHLEKEMINSVHVGVSEQGIVSSNEKINKQAALTIFSVPDVEVPPTLSVKITSKDENIFDNEVKNEPNDLPDTVYKDTSSHLTNGDLSHKEDPTGSENLKPTRKASHVVKQERAENGSQNSRELPSYMAATESAKAKLRAQGSPRQGQEGSERNNPAGRQSLPSSTNSKISSHSPRTQRPVEIGGKGGHKSDKTVSSSREGNGKVVQAEWKR 1605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1920 1605 Pfam Protein of unknown function (DUF4005) 1506 1584 IPR025064 -
Lal14g1920 1605 Pfam Protein of unknown function (DUF4005) 484 563 IPR025064 -
Lal14g1920 1605 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 902 936 IPR002885 -
Lal14g1920 1605 MobiDBLite consensus disorder prediction 432 474 - -
Lal14g1920 1605 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 696 730 IPR002885 -
Lal14g1920 1605 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 1077 1111 IPR002885 -
Lal14g1920 1605 ProSiteProfiles IQ motif profile. 122 149 IPR000048 GO:0005515
Lal14g1920 1605 MobiDBLite consensus disorder prediction 1576 1590 - -
Lal14g1920 1605 MobiDBLite consensus disorder prediction 1326 1358 - -
Lal14g1920 1605 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 972 1006 IPR002885 -
Lal14g1920 1605 MobiDBLite consensus disorder prediction 455 470 - -
Lal14g1920 1605 MobiDBLite consensus disorder prediction 1453 1605 - -
Lal14g1920 1605 Pfam IQ calmodulin-binding motif 100 119 IPR000048 GO:0005515
Lal14g1920 1605 Pfam IQ calmodulin-binding motif 122 139 IPR000048 GO:0005515
Lal14g1920 1605 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 1007 1041 IPR002885 -
Lal14g1920 1605 Gene3D - 96 144 - -
Lal14g1920 1605 ProSiteProfiles IQ motif profile. 100 126 IPR000048 GO:0005515
Lal14g1920 1605 Pfam PPR repeat family 866 915 IPR002885 -
Lal14g1920 1605 Pfam PPR repeat family 796 845 IPR002885 -
Lal14g1920 1605 Pfam PPR repeat family 1184 1231 IPR002885 -
Lal14g1920 1605 Pfam PPR repeat family 1076 1125 IPR002885 -
Lal14g1920 1605 Pfam PPR repeat family 695 744 IPR002885 -
Lal14g1920 1605 Pfam PPR repeat family 971 1020 IPR002885 -
Lal14g1920 1605 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 1253 1287 IPR002885 -
Lal14g1920 1605 MobiDBLite consensus disorder prediction 261 290 - -
Lal14g1920 1605 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 762 796 IPR002885 -
Lal14g1920 1605 TIGRFAM PPR: pentatricopeptide repeat domain 974 1008 IPR002885 -
Lal14g1920 1605 TIGRFAM PPR: pentatricopeptide repeat domain 1044 1078 IPR002885 -
Lal14g1920 1605 TIGRFAM PPR: pentatricopeptide repeat domain 1079 1112 IPR002885 -
Lal14g1920 1605 TIGRFAM PPR: pentatricopeptide repeat domain 904 938 IPR002885 -
Lal14g1920 1605 TIGRFAM PPR: pentatricopeptide repeat domain 1149 1176 IPR002885 -
Lal14g1920 1605 TIGRFAM PPR: pentatricopeptide repeat domain 1010 1043 IPR002885 -
Lal14g1920 1605 TIGRFAM PPR: pentatricopeptide repeat domain 834 868 IPR002885 -
Lal14g1920 1605 TIGRFAM PPR: pentatricopeptide repeat domain 1256 1287 IPR002885 -
Lal14g1920 1605 TIGRFAM PPR: pentatricopeptide repeat domain 1186 1218 IPR002885 -
Lal14g1920 1605 TIGRFAM PPR: pentatricopeptide repeat domain 1114 1148 IPR002885 -
Lal14g1920 1605 TIGRFAM PPR: pentatricopeptide repeat domain 869 902 IPR002885 -
Lal14g1920 1605 TIGRFAM PPR: pentatricopeptide repeat domain 939 972 IPR002885 -
Lal14g1920 1605 TIGRFAM PPR: pentatricopeptide repeat domain 698 730 IPR002885 -
Lal14g1920 1605 TIGRFAM PPR: pentatricopeptide repeat domain 764 798 IPR002885 -
Lal14g1920 1605 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 1042 1076 IPR002885 -
Lal14g1920 1605 MobiDBLite consensus disorder prediction 555 569 - -
Lal14g1920 1605 MobiDBLite consensus disorder prediction 519 550 - -
Lal14g1920 1605 MobiDBLite consensus disorder prediction 43 65 - -
Lal14g1920 1605 MobiDBLite consensus disorder prediction 249 297 - -
Lal14g1920 1605 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 867 901 IPR002885 -
Lal14g1920 1605 MobiDBLite consensus disorder prediction 1537 1571 - -
Lal14g1920 1605 Pfam PPR repeat 764 793 IPR002885 -
Lal14g1920 1605 Pfam PPR repeat 669 689 IPR002885 -
Lal14g1920 1605 Pfam PPR repeat 1256 1285 IPR002885 -
Lal14g1920 1605 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 1218 1252 IPR002885 -
Lal14g1920 1605 PANTHER OS07G0101200 PROTEIN 587 1306 - -
Lal14g1920 1605 SMART iq_5 97 119 IPR000048 GO:0005515
Lal14g1920 1605 SMART iq_5 120 141 IPR000048 GO:0005515
Lal14g1920 1605 MobiDBLite consensus disorder prediction 1476 1504 - -
Lal14g1920 1605 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 797 831 IPR002885 -
Lal14g1920 1605 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 937 971 IPR002885 -
Lal14g1920 1605 MobiDBLite consensus disorder prediction 1505 1520 - -
Lal14g1920 1605 Gene3D Tetratricopeptide repeat domain 562 755 IPR011990 GO:0005515
Lal14g1920 1605 Gene3D Tetratricopeptide repeat domain 1105 1178 IPR011990 GO:0005515
Lal14g1920 1605 Gene3D Tetratricopeptide repeat domain 860 926 IPR011990 GO:0005515
Lal14g1920 1605 Gene3D Tetratricopeptide repeat domain 1034 1104 IPR011990 GO:0005515
Lal14g1920 1605 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 587 1306 - -
Lal14g1920 1605 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 1112 1146 IPR002885 -
Lal14g1920 1605 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 832 866 IPR002885 -
Lal14g1920 1605 MobiDBLite consensus disorder prediction 503 575 - -
Lal14g1920 1605 Gene3D Tetratricopeptide repeat domain 756 859 IPR011990 GO:0005515
Lal14g1920 1605 Gene3D Tetratricopeptide repeat domain 927 1033 IPR011990 GO:0005515
Lal14g1920 1605 Gene3D Tetratricopeptide repeat domain 1179 1326 IPR011990 GO:0005515
Lal14g1920 1605 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 1183 1217 IPR002885 -
Lal14g1920 1605 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 78 163 IPR027417 -
Lal14g1920 1605 Pfam PPR repeat 1037 1069 IPR002885 -
Lal14g1920 1605 Pfam PPR repeat 1142 1175 IPR002885 -
Lal14g1920 1605 Pfam PPR repeat 932 963 IPR002885 -
Lal14g1920 1605 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 1147 1177 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1920 Lal-Chr14 18476648 18486300 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g1920 27 584 IQD Protein Family AT1G74690 46.062 2.22e-118 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1920 - - gmx:100811379 1220.68