Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1915 ATGGGTTCAGAGAGTGCTGCTCCTATGGTTGAAAAATCAAAAAGCAGATCTCCTCCTTGTAAAAAGAACCAAGGGAAAGTGCCCAGGAGAATTCACAAGGCTGAAAGAGAGAAAATGAAGCGTGAACATTTGAATGAACTCTTTCTTGATCTTGCTAATGCAATTGGTGCTTTTTTCTTCTCTTGTTTTCTCTCTTTTATCTCTTTTTTTTGTGGTGATGGTGGTGGGACAGACCTAAACGAGCAGAACAATGGAAAGGCTTCTATATTGTGTGAAGCTGCTAGACTAATAAAGGATTTGGCCTGTCAGATTCAGTCCCTCAAGAAGGAGAATGTTTCTCTGTTGTCTGAATCTTGTTACGTGGCCATGGAGAAAAATGAGCTGAAGGAGGAGAGTTCTGTTCTAGAAGCTCAAATTGAGAAGCTTCATGGTGAGATACAAGCAAAGGTGACTCAGTCTAAACCTGACCTGAATGCACCTCCTAGTTTGGAACTTGAGCTGCAAGCACAGACAAATTATCCTGGTCAGATGCTCCAATTGCCTTCCATAGAACCTACCTTGCAGCAAGGACCTGCGGTTTTGGTTGTTCCTTTTCATCCTGATCTTCAAGCTGCGTTTTCAGCTCCTAATGTTGCTGAGCTCGCACCAAAGCCTACATCCATTGTGAGCAAACCACATGCAAGGTATCCTACACCAGCAGATTCATGGCCATTGCAGCTGCTTGGAGAGCAACCTACTTCAAGTTAA 747 0.4337 MGSESAAPMVEKSKSRSPPCKKNQGKVPRRIHKAEREKMKREHLNELFLDLANAIGAFFFSCFLSFISFFCGDGGGTDLNEQNNGKASILCEAARLIKDLACQIQSLKKENVSLLSESCYVAMEKNELKEESSVLEAQIEKLHGEIQAKVTQSKPDLNAPPSLELELQAQTNYPGQMLQLPSIEPTLQQGPAVLVVPFHPDLQAAFSAPNVAELAPKPTSIVSKPHARYPTPADSWPLQLLGEQPTSS 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1915 248 PANTHER TRANSCRIPTION FACTOR BHLH47 78 247 - -
Lal14g1915 248 PANTHER TRANSCRIPTION FACTOR BHLH47 6 55 - -
Lal14g1915 248 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 26 114 IPR036638 GO:0046983
Lal14g1915 248 MobiDBLite consensus disorder prediction 1 31 - -
Lal14g1915 248 MobiDBLite consensus disorder prediction 221 248 - -
Lal14g1915 248 Gene3D - 28 154 IPR036638 GO:0046983
Lal14g1915 248 PANTHER TRANSCRIPTION FACTOR BHLH47 78 247 - -
Lal14g1915 248 PANTHER TRANSCRIPTION FACTOR BHLH47 6 55 - -
Lal14g1915 248 Pfam Helix-loop-helix DNA-binding domain 29 100 IPR011598 GO:0046983
Lal14g1915 248 Coils Coil 97 117 - -
Lal14g1915 248 Coils Coil 125 145 - -
Lal14g1915 248 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 28 100 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1915 Lal-Chr14 18459458 18462239 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g1915 20 244 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G47640 46.914 8.02e-56 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1915 - - mtr:MTR_4g108360 330.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1915 14 18459458 18462239 Lal14g1915 14 18459458 18462239 ECH
Lal14g1915 14 18459458 18462239 Lal7g1398 7 18960041 18962415 LSH