Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1914 ATGGAAGGAGATGATGATCTCCACCACCACTATCAACAACACCGTCAAAACTTCCCATTCCAACTCCTTGAGAAAAAGGAAGATCAAGAAGCAGCATCATGCTCCACCTCATCACCATACCCAACCCTAGCAATCTCACCAACAGAACCAAGAACGTCCAATTCAAACCGATCCAACCAACTTGTTGCAACTCCAACAACCAGCACTTCCACAGAACCCTCTAAGAAACCACTGCTAAAGAGAGCCTCCACCAAAGACCGCCACACAAAGGTGGACGGCCGCGGCCGCCGCATCCGAATGCCGGCTCTCTGCGCTGCGCGTGTATTCCAGCTCACGCGTGAGCTCGGCCACAAGTCAGATGGCGAAACCATCGAGTGGCTCCTCCAGCAGGCGGAACCATCCGTCATAGCCGCTACCGGAACGGGAACAATCCCCGCCAACTTCACATCACTAAACATCTCTCTCAGAAGCTCAGGGTCCACCATGTCGGTGCCATCACAAGTAAGATCCTCGTACTTCAACCCAAACTTCTCAGTTCAACAAGGTAGGACCTTGTTTCCCGGAATAGGATTATCATTCGATAACAACAACACGTCAACGCTACTGAATTTCCAACAACCCAATAGCCTAACCATGTTGCAAGCAAAGCAAGAACTTCGAGACAGTGGTGGTCAGTCTTCTTCAACCACGCTGGATTTGTCTGATACAAACACGGTTGGAGGTTTAGGAAGAAAAAGAAGACCTAGTGAGCAAGACCTTTCGTCAACGCAGCATCAAATGGGGGGTTACCTGCTGCAGTCAAGTGCAGGTGCTATTCCGGCAAGTCATCCTCATACTCCGGCAAATATATGGATGATGGCGCAGGCTGCAGCGGCCGCGAATTCAAATAACCAGATTATGAGTCATGGCGACCCTATATGGACTTTTCCACAAGTTAATAACGGTGCTGCTTTGTATAGAGGTACTGTTTCTAGTGGCTTGCATTTTATGAATTATCCTACACCCATGACCTTGTTGCCAGGTCAGCAACAATTAGGTTTATCTGGTGGTGGTGGCAGTGGTAATATAAATATGAATGAAGGGCATTTGAGTATCTTTTCAGGAGTTGGCCCTTATCGGCCGGTGACCGGCGTTTTAGAATCTCAGGAAAGTGAGTCTCAATCTCAGCGCGGTGGCAGTGATGATCGTCATGATTCCACAAAAATCTCTGCCATGAATCTCGAGGTTTACTGCATCAATGATTAA 1245 0.4843 MEGDDDLHHHYQQHRQNFPFQLLEKKEDQEAASCSTSSPYPTLAISPTEPRTSNSNRSNQLVATPTTSTSTEPSKKPLLKRASTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPSVIAATGTGTIPANFTSLNISLRSSGSTMSVPSQVRSSYFNPNFSVQQGRTLFPGIGLSFDNNNTSTLLNFQQPNSLTMLQAKQELRDSGGQSSSTTLDLSDTNTVGGLGRKRRPSEQDLSSTQHQMGGYLLQSSAGAIPASHPHTPANIWMMAQAAAAANSNNQIMSHGDPIWTFPQVNNGAALYRGTVSSGLHFMNYPTPMTLLPGQQQLGLSGGGGSGNINMNEGHLSIFSGVGPYRPVTGVLESQESESQSQRGGSDDRHDSTKISAMNLEVYCIND 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1914 414 ProSiteProfiles TCP domain profile. 84 138 IPR017887 -
Lal14g1914 414 MobiDBLite consensus disorder prediction 1 96 - -
Lal14g1914 414 MobiDBLite consensus disorder prediction 379 400 - -
Lal14g1914 414 MobiDBLite consensus disorder prediction 78 96 - -
Lal14g1914 414 MobiDBLite consensus disorder prediction 217 257 - -
Lal14g1914 414 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 9 401 IPR005333 GO:0003700
Lal14g1914 414 MobiDBLite consensus disorder prediction 32 77 - -
Lal14g1914 414 Pfam TCP family transcription factor 83 251 IPR017887 -
Lal14g1914 414 PANTHER TRANSCRIPTION FACTOR TCP14-LIKE 9 401 - -
Lal14g1914 414 MobiDBLite consensus disorder prediction 217 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1914 Lal-Chr14 18452938 18455163 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g1914 74 345 TCP Transcription Factor Family AT3G47620 51.220 4.21e-68 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lal14g1914 TCP 1.2e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1914 - - cam:101512124 520.005
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1914 14 18452938 18455163 Lal14g1914 14 18452938 18455163 ECH
Lal14g1914 14 18452938 18455163 Lal7g1397 7 18951276 18952526 LSH
Lal14g1914 14 18452938 18455163 Lal19g1478 19 17264367 17265602 LSH