Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1908 ATGAAGAAGATGAATGTTGTGGTGAAAAGAGAAGTTGTGAATAATTCATCGTCTTCAGGGGTGAGAACCAGTGTTAGATACGGGGAGTGCCAGAAGAATCATGCAGCAAACAGTGGAGGGTATGCAGTGGATGGGTGCAGGGAGTTCTTGGCTAGCACGGGAGAGGGAACAAGTGGAGCCCTTACATGTGCTGCTTGTGGTTGTCACAGAAACTTTCACAAAAGGGAACTCAGCAGTGAAACCTGA 246 0.4756 MKKMNVVVKREVVNNSSSSGVRTSVRYGECQKNHAANSGGYAVDGCREFLASTGEGTSGALTCAACGCHRNFHKRELSSET 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1908 81 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 1 80 - -
Lal14g1908 81 Pfam ZF-HD protein dimerisation region 25 77 IPR006456 -
Lal14g1908 81 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 27 76 IPR006456 -
Lal14g1908 81 PANTHER BNAA09G44460D PROTEIN 1 80 - -
Lal14g1908 81 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 26 76 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1908 Lal-Chr14 18419251 18419496 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g1908 1 81 Zinc finger-homeobox gene family AT3G28917 61.798 1.57e-29 99.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Lal14g1908 ZF-HD_dimer 1.1e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1908 - - twl:119987355 124.405
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1908 14 18419251 18419496 Lal7g1393 7 18918268 18918513 LSH