Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1906 ATGGAATCTAAACCGCCTATGATTTGGCAATCTAACTACGAAATAGATGAAACCCCATTTCCGTTTACGTATCAATTCAACTCATATGATTACTACATGGGCGAAAATGTTAATGTGTCCTGTGCACTGGATAACTGGCCACGAGAAATTCCGGCATTTCAAGATCACCATATTGATCCTGTCACTTTTATGGAGTCTTTTTACTCTACAGATCCTTTATATGAAAACCCCACAATCGAACCAATATCCAGTGTTCACCTACAAGATTGTGGTTTTTATGATATTAGAAACGAGTTTCCTGTCTGGAATGAAATCGATACCGAGTTTGAGGAAAGTGTCAAGGAAATGGGGGAAGATGAGAAGTTTGGAAAGGGTAAGAGGGTTAGAGAAGATACGAGTATGAGCACTATGATGTTGTCAAGGGATAACATATCTCAGTACTTCTACATGCCAATAACACAAGCTGCAAAAGAGCTTAACGTAGGGCTTACACTTTTGAAGAAGAGGTGCAGGGATTTGGGCATTAGAAGGTGGCCTCATAGAAAGTTGATGAGCCTTCAAACTCTTATAAATAATGTGCAGGAACTTGGGAGGAATGAGGAAGAAGAGAGTGAAATGAAGTTAAGGAATGCGATAGAGATTTTGGAAAGGGAAAAGAAAATGTTAGAGGAGATGCCTGATATGCAGCTTGGAGATACTACAAAAAGGCTGAGACAAGCATGTTTTAAAGCAACCTACAAGAAGAGGATGCTCATGGGAATGATGCAATCACATTCTTCTGTTCCTTCTCTCACTTCTCCTCCTAAATATTTTCACAGTATTTAG 825 0.3939 MESKPPMIWQSNYEIDETPFPFTYQFNSYDYYMGENVNVSCALDNWPREIPAFQDHHIDPVTFMESFYSTDPLYENPTIEPISSVHLQDCGFYDIRNEFPVWNEIDTEFEESVKEMGEDEKFGKGKRVREDTSMSTMMLSRDNISQYFYMPITQAAKELNVGLTLLKKRCRDLGIRRWPHRKLMSLQTLINNVQELGRNEEEESEMKLRNAIEILEREKKMLEEMPDMQLGDTTKRLRQACFKATYKKRMLMGMMQSHSSVPSLTSPPKYFHSI 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1906 274 PANTHER PROTEIN RKD4 84 260 IPR044607 GO:0003700
Lal14g1906 274 PANTHER PROTEIN RKD1-RELATED 84 260 - -
Lal14g1906 274 Pfam RWP-RK domain 139 186 IPR003035 -
Lal14g1906 274 ProSiteProfiles RWP-RK domain profile. 120 206 IPR003035 -
Lal14g1906 274 Coils Coil 198 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1906 Lal-Chr14 18410564 18411670 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g1906 53 254 AtRKD Transcription Factor Family AT1G18790 48.792 3.80e-54 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Lal14g1906 RWP-RK 7.1e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1906 - - gmx:100788666 283.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1906 14 18410564 18411670 Lal14g1906 14 18410564 18411670 ECH
Lal14g1906 14 18410564 18411670 Lal7g1391 7 18907597 18908895 LSH