Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1901 ATGGAAAGTGGAGGATTTGGGTTTGTGTGGAAATTTATATTATGCGGAATTTCAGCAGCTCTCGGCGCTTGCTTTGCTACTGGTGGGGCCCTCACTGGAGCCATAGCTGGTGCTTTAGCAGCTAAGGCTTCTAAGAGTAGTTTTCTTCGAGGAACTTCATTGGGTGCCATTGCTGGGGCTATAATCTCAGTGGAAGTGTTGGAAGCCTCCTGCGCCTACTGCTTTATCGACCAAACTGGTTCAAGGGCCACATCATCTATGGCAGATTTCATAGAGGGACTTTTTCGCGGGAGGCTTGTAGAGGAATCACTTACACCTGTTATTTTAACTGCTTATAATTTGCAGGCTCGCTTTGCTGACACAGGATATGATGAGATTCATGATGATCACAGCTTAGCAGCATCTTCCAGAGGATTGTCGGGGGATTCATTAAACAAGTTACCACATCATGTTGTCTTGAAGGACATGAAGGCAGACTATACCTGCTGTTCAATATGTTTGCAGGATATTGAAGTAGGAGAAACTGCGAGAAGCTTACCTCGTTGCCAGCATACATTTCATTTGATATGTGTGGACAAATGGCTTGTCGAGAATGATTCATGTCCTGTCTGCAGACAGGGTATGTAG 627 0.4514 MESGGFGFVWKFILCGISAALGACFATGGALTGAIAGALAAKASKSSFLRGTSLGAIAGAIISVEVLEASCAYCFIDQTGSRATSSMADFIEGLFRGRLVEESLTPVILTAYNLQARFADTGYDEIHDDHSLAASSRGLSGDSLNKLPHHVVLKDMKADYTCCSICLQDIEVGETARSLPRCQHTFHLICVDKWLVENDSCPVCRQGM 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1901 208 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 124 208 IPR013083 -
Lal14g1901 208 ProSiteProfiles Zinc finger RING-type profile. 163 205 IPR001841 -
Lal14g1901 208 SUPERFAMILY RING/U-box 144 206 - -
Lal14g1901 208 PANTHER NEP1-INTERACTING PROTEIN-LIKE 2 8 207 IPR044523 -
Lal14g1901 208 PANTHER NEP1-INTERACTING PROTEIN-LIKE 2 8 207 - -
Lal14g1901 208 Pfam Ring finger domain 163 205 IPR001841 -
Lal14g1901 208 SMART ring_2 163 204 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1901 Lal-Chr14 18393762 18395585 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g1901 9 208 C3H Transcription Factor Family AT1G74410 52.239 1.46e-64 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1901 - - gmx:100800105 277.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1901 14 18393762 18395585 Lal14g1901 14 18393762 18395585 ECH
Lal14g1901 14 18393762 18395585 Lal19g1468 19 17198707 17202230 LSH