Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1899 ATGGAGCTTGAGACAGAGAGTGGTGGACTTAATTTGAATAAAGAAACCAATTTTGCTGGAAACAGTAATAATCATGATGGCATCATTGACAGAATTACTTCAGTAAAATCAGTAAGACAAGTAATTGATGCACTGAATGTGGAGGGACAGCATATAGATATCATACTAGCTGAAGTTGACCTTCCGATAGAGATGGGCATGAAGATGTTGAAGTACATAGCATGGGATAATGAATTACGCCATATTCCTGTTATAATAATGTCTGCACGAGATGAGGTATCCATTGTTGTTAAGTGTCTGAGACTTGGAGCAGCAGACTACCTAGTAAAGCCTTTACGTACTAATGAATTATTAAATTTGTGGACGCACATGTGGAGAAGGAGACGCATGCTTGGACTTGTAGAGAACAACATCTTGAATTATGACTTTGACCTAGTAGCATCAGACCCAAGTGATGCCAACACGACCAGTACCACCTTGTTCTCTGATGACACGGATGATAAGTCGAAAAGAAGCACTGATCCAGAGCCAGGGATATCAATCCAACAATTTCAAGAGGCTAGTATTGCCGTAGCTGTTGACGATGTTGAGGAGATTCGAGATGGTCATGTATCACAATATCAGCCTGGTGTGCCTGGAATTAGTGATCGCCGAACAGGACATTTTTCATCTGGTCCAAAGAAGAGTGAACTAAGAATTGGAGAGTCCTCAGCCTTCTTCACTTATGTCAACGCAAAAATGCTGAAGAGCGACTTTGAGGAGATTGTTCATGTTGACAACAATGCTACTACACAAGTGCAGATGGAAGACATGAATCAAACAAGTGCTCAACAGGGGGGTAATGACCTTCTAAGACGTGAAAATGGAGAAACATTTGTAAACCATTCACAAAATGACTTACCCAGCAGCAATAGTGTTCCAGATTCTTTCTCTATTAAGAGATCCTGTACACCACCTGCATCGGTAGAAATTTCACAGCAAAAGCATTACAAGGATGAACACCCTCAGGGCATGGTGTATCGAAGAGATGGAAGCCATGGTTCTGATCTTAAAACATCTAGCATAACTGACCAACATGCTCATCCGTATTATATTCCAGGAGTTGTTAATCATGTTATGATTCCATTGGCAGCGCAACTGAATCAAAGGAATATTCAGGGTCTTGCTACTTCAGCTCTTGTTGCACAGTACAACCATCTTTCCCAATATCCTCTTCATGCAACTGGGATGACATCCTTCCAATATATATACTTACAGCCTGGTCAGATTTCTACACCTCATTCATGGTCATCATTAGGAAATTCAAGTTTATCCGAAGTAAACTTAAGTAAAGTTGAGAGAGAAGCAGCATTGATGAAGTTTAGACAGAAAAGAAAAGAACGATGCTTTGATAAGAAAATTAGATATGTCAATCGCAAACGACTTGCTGAAAGGCAGACTCGTGTGAAAGGACAGTTTGTGAGAAAGTTGAATGGTGTTAATGTGGATCTTAATGGGCAGCCAGTAGATGATGAAGAGGAGGAAGCTTGA 1530 0.4052 MELETESGGLNLNKETNFAGNSNNHDGIIDRITSVKSVRQVIDALNVEGQHIDIILAEVDLPIEMGMKMLKYIAWDNELRHIPVIIMSARDEVSIVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLVENNILNYDFDLVASDPSDANTTSTTLFSDDTDDKSKRSTDPEPGISIQQFQEASIAVAVDDVEEIRDGHVSQYQPGVPGISDRRTGHFSSGPKKSELRIGESSAFFTYVNAKMLKSDFEEIVHVDNNATTQVQMEDMNQTSAQQGGNDLLRRENGETFVNHSQNDLPSSNSVPDSFSIKRSCTPPASVEISQQKHYKDEHPQGMVYRRDGSHGSDLKTSSITDQHAHPYYIPGVVNHVMIPLAAQLNQRNIQGLATSALVAQYNHLSQYPLHATGMTSFQYIYLQPGQISTPHSWSSLGNSSLSEVNLSKVEREAALMKFRQKRKERCFDKKIRYVNRKRLAERQTRVKGQFVRKLNGVNVDLNGQPVDDEEEEA 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1899 509 Gene3D - 24 179 - -
Lal14g1899 509 ProSiteProfiles CCT domain profile. 447 489 IPR010402 GO:0005515
Lal14g1899 509 PANTHER RESPONSE REGULATOR AND TRANSCRIPTION FACTOR RR-A-TYPE FAMILY-RELATED 31 491 - -
Lal14g1899 509 MobiDBLite consensus disorder prediction 293 314 - -
Lal14g1899 509 SMART REC_2 12 121 IPR001789 GO:0000160
Lal14g1899 509 MobiDBLite consensus disorder prediction 205 228 - -
Lal14g1899 509 Pfam CCT motif 447 489 IPR010402 GO:0005515
Lal14g1899 509 ProSiteProfiles Response regulatory domain profile. 1 125 IPR001789 GO:0000160
Lal14g1899 509 PANTHER TWO-COMPONENT RESPONSE REGULATOR 31 491 IPR045279 GO:0009736
Lal14g1899 509 MobiDBLite consensus disorder prediction 154 178 - -
Lal14g1899 509 SUPERFAMILY CheY-like 48 131 IPR011006 -
Lal14g1899 509 Pfam Response regulator receiver domain 31 119 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1899 Lal-Chr14 18385503 18390037 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g1899 31 501 Response Regulator Gene Family AT5G61380 45.053 1.27e-135 404
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Lal14g1899 Response_reg 3.4e-13 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1899 K12127 - gmx:100786522 674.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1899 14 18385503 18390037 Lal14g1899 14 18385503 18390037 ECH