Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1875 CCCAAAAGAGAAGAAAAAGAAATAGAGGGAGAGAAAATAGCAACGGGGTCCGACCCGAGTCCTCAATTTTCGTTATCAGATTCTTCTGCAGTTCCATTTTCCCGCGGTCTTCACTTACTTCACCTCACCCTTCTCACTGTTTATGAAATTCAAAATTCCGCTGAGTTACAGGTAACGACGGAAAACAAGAGTATTAAGGTTTTGATGGAGTTTCCTCAAGCGCATGCCTTTGGAACCCAAGGAACGAAATCGACGCATGACTTTCTGTCACTCTACAGTAATTCAACTACCCAACATGATTCAAGGCCACCTTCTCAAGGAAGTCGACTCAAGACCCATGATTTCTTGCAGCCACTAGAACGAGCAGAAACAAAAGCCAGTGCCAAGGAGGAAGCCACAGATGAAATATCATTGATAGCTCCTAAGGCACCTCCTCTAACACCACCTTCTGTTGAGCACCTCTTACCCGGAGGAATTGGAACTTACAGTATTAATCACATTTCCTATTCTAATCATAATACTCAAAGGGTTCCAAAGCCAGAGACATCCCTTTTCACTGTGCATCAAGCCACTAGTACGGATAAAAATGCTGAAAACTCCAACTGCAGTTCGTATACTTCAAGTGGTTTCACTTTTTGGGAAGAGTCTGCTGTTAAGAAGGGAAAGATAGGGAAGGAGAATAATGTTGCTGACAAACCCATTCTAGGAGTGACAGAGTCTGCGGCCAAGCCAGGGCAGTGGACGTTGAGTGAGGGAACGTCACCGTCGTTTCATAACAATCGCCACAACAGCTTCAACTCACGCTACTCCTCTCAGACAACTGGGCAGAAGAACCAGAGTTTTATTGAAATGATGAAGTCCGCAAAGGACCGTGCCCAGGATGAAGAAATAGAAAACGAAGAAGCATTTTTTCTTAAGAAAGAATCCCAAAGTGCAGAACTTCAAGTGAAGGTGGATGGGAAGAGTACTGAACAAAAGCCAAACACGCCAAGATCAAAACATTCTGCAACTGAGCAGCGGAGAAGAAGCAAAATTAATGACAGGCAAAGTTGCTTGTCTCCTGTTGGTGTTGTCTTTTTCTATGTTACATGTGTGTCACAATTCCATATGCTACGAGAGCTTATGCCGCACGGTGACCAAAAGAGGGACAAAGCATCTTTTCTGTTAGAGGTTATCGAGTATATTCATTTTTTACAAGCGAAGGTGCAGAAGTATGAAGGTTCATTCAAAGGGTGGAGTCACGAGCCAGAAAAGTGGATGTCTTGGATAAATAATGACAAGCCAGCAGAAAGCTTTGAACATCCTGGCACAAATAGTGGCTCAGGTCCATCTCCATCATTGCTGTTTGCTTCAAATACGGAAGAGAAAAATATCACCATTTCCCCCAAAACTCCTGGAAGTATTCAGAATGTAGAATCTGGCGTGGGCACAGCATCTAACTTCAAGACAATGGATCATCATCCTGGCATAGCGAACAAGGCCTGCCCGGTTCCTATTTCTCCACAGCCAAATTTATTCACTCCAACCCAAAATGGAGGTCAAGGTGGAATGATGTCTCAGCTCACACATAGATTGGCATTTGATGTAGAGAACGCTATATATCAACAACCTTCGGAGGAGTGTCAGACTTGGACAGCTACAAGTGAAAAACTGAAAGATAAAGAGCTCACCATTGAAGGTGGTGCTATTAGCATATCAAGTGTGTACTCAAAAGGATTGTTGGATACACTTACGCATGCACTGCAAAGTTCAGGAGTGGATTTATCACAAGCTAGCATCTCAGTGCAAATTGAACTTGGTAAGCAAGCAAATATCAGACCAACTTTACCAATGTCAATGTGTGGTGCTAAGGGTGATGAAGTTCCTTCCAACAATCAGAGGATGATGCGATCTAGAGTTGCTAGCTCTGAGAAGTCTGATCAAGCAGTAAAGAAGCTAAAGACGTGCAGAACCTAA 1956 0.434 PKREEKEIEGEKIATGSDPSPQFSLSDSSAVPFSRGLHLLHLTLLTVYEIQNSAELQVTTENKSIKVLMEFPQAHAFGTQGTKSTHDFLSLYSNSTTQHDSRPPSQGSRLKTHDFLQPLERAETKASAKEEATDEISLIAPKAPPLTPPSVEHLLPGGIGTYSINHISYSNHNTQRVPKPETSLFTVHQATSTDKNAENSNCSSYTSSGFTFWEESAVKKGKIGKENNVADKPILGVTESAAKPGQWTLSEGTSPSFHNNRHNSFNSRYSSQTTGQKNQSFIEMMKSAKDRAQDEEIENEEAFFLKKESQSAELQVKVDGKSTEQKPNTPRSKHSATEQRRRSKINDRQSCLSPVGVVFFYVTCVSQFHMLRELMPHGDQKRDKASFLLEVIEYIHFLQAKVQKYEGSFKGWSHEPEKWMSWINNDKPAESFEHPGTNSGSGPSPSLLFASNTEEKNITISPKTPGSIQNVESGVGTASNFKTMDHHPGIANKACPVPISPQPNLFTPTQNGGQGGMMSQLTHRLAFDVENAIYQQPSEECQTWTATSEKLKDKELTIEGGAISISSVYSKGLLDTLTHALQSSGVDLSQASISVQIELGKQANIRPTLPMSMCGAKGDEVPSNNQRMMRSRVASSEKSDQAVKKLKTCRT 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1875 651 MobiDBLite consensus disorder prediction 245 277 - -
Lal14g1875 651 Gene3D - 327 418 IPR036638 GO:0046983
Lal14g1875 651 PANTHER TRANSCRIPTION FACTOR BIM1 69 648 - -
Lal14g1875 651 MobiDBLite consensus disorder prediction 324 347 - -
Lal14g1875 651 MobiDBLite consensus disorder prediction 629 651 - -
Lal14g1875 651 MobiDBLite consensus disorder prediction 633 651 - -
Lal14g1875 651 MobiDBLite consensus disorder prediction 314 347 - -
Lal14g1875 651 MobiDBLite consensus disorder prediction 1 28 - -
Lal14g1875 651 PANTHER BES1-INTERACTING MYC-LIKE PROTEIN 69 648 IPR044295 GO:0003700|GO:0006351|GO:0046983
Lal14g1875 651 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 329 398 IPR011598 GO:0046983
Lal14g1875 651 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 367 423 IPR036638 GO:0046983
Lal14g1875 651 CDD bHLH_AtBIM_like 328 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1875 Lal-Chr14 18217811 18226246 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g1875 69 603 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G08130 44.385 3.18e-103 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lal14g1875 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1875 - - gmx:100808016 781.171
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1875 14 18217811 18226246 Lal14g1875 14 18217811 18226246 ECH
Lal14g1875 14 18217811 18226246 Lal7g1333 7 18551373 18555225 LSH
Lal14g1875 14 18217811 18226246 Lal19g1431 19 16972807 16981546 LSH