Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1874 ATGGCAGATGTTACCACCTTTCTCCGCAACCACGAACCCGACGAAGATTTCGACTTCGATTTCGATTCCATTATATTTCCCTACTGTTCCCACTCTTCCCCCGATTTCAATTTCGATTTTTATTCTTCCGAACCCGAATTCCTACCCACTCCTGAACCCGGTTCACCTTCCCTCTTCGACCGTCACAACCAGGTTAATTTCGTAATGGATCTCTTTCAACAACGCGTTGAGCAATCTCAGGTCACGGGGCTTGAATATTTCGTCACTGAACCCCCAAACGACGCCGCTTTTGCCGTTATCGATGGATACTCTGACTTGGGCATCGACATGGATGATAATTTGGGGCTCGATTTAGGGTTTGACACCGAGAGCGATATGCTTTCTAATGAGGCACCTTTTCGTAACTGTAATCGCGTTATAGGGTTTGGATCGGATTCTGACGAGGAAGAAGAAGAGAACGAGGTTTTGGAGAATTGTGTGCATTCCGATGAAAACTATAACGATCTAAACGACGACGTTTCAATCATTCCTCTGCGTTGGGATTCCCTTCAGTTGGAGGAGGATAACAAGGACAGAAACGATGATTTTGAGTGGGAGGAAGTGGATGGTAGAGTTGATGAGAGAGAAGTTTTGAGCATGCTCGCCATTGATGATGAGAGGTCGATTTCGGTTTCAGTGACTCCGGTGATAGAAGAAGAAGAAGAAGAAGAAGAAGTGAGTGTTGTGAGGGTGGGTGGCATGGAGAATTTGGAGTGGGAAGTGTTGTTGAATGCAAATAATTTGGATATAACCAGAAGTCCTGATATGGACCATGATGATGATTTAGAAGAGCCTTATTTTAGTGATCATGATGATTATATTTACACTGCTGAGTATGAAATGATGTTTGGTCAATTTTCTGAGAATGAAAACCCTTTAAGGCCTCCGGCTTCTGTATCTGTTGTTCGGTACCTGCCATCAGTGGCTGTGACCAAGGAAGATGTGGACAACAACAATGCACTTTGTGCTGTTTGCAAAGAGGACTTTGCTGAAGGAGATCAAGCTAAGCAATTGCCGTGTTCTCATCGATACCATGGTGATTGCATTGTACCTTGGTTGGCCATTCGAAACACTTGCCCTGTTTGCCGCTTTGAGTTTCCAACTGATGATGCTGATTATGAGCGTAGGAGGGCCGATAGATCTGTCCCGAGTCTGTGA 1197 0.4486 MADVTTFLRNHEPDEDFDFDFDSIIFPYCSHSSPDFNFDFYSSEPEFLPTPEPGSPSLFDRHNQVNFVMDLFQQRVEQSQVTGLEYFVTEPPNDAAFAVIDGYSDLGIDMDDNLGLDLGFDTESDMLSNEAPFRNCNRVIGFGSDSDEEEEENEVLENCVHSDENYNDLNDDVSIIPLRWDSLQLEEDNKDRNDDFEWEEVDGRVDEREVLSMLAIDDERSISVSVTPVIEEEEEEEEVSVVRVGGMENLEWEVLLNANNLDITRSPDMDHDDDLEEPYFSDHDDYIYTAEYEMMFGQFSENENPLRPPASVSVVRYLPSVAVTKEDVDNNNALCAVCKEDFAEGDQAKQLPCSHRYHGDCIVPWLAIRNTCPVCRFEFPTDDADYERRRADRSVPSL 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1874 398 Pfam Ring finger domain 335 376 IPR001841 -
Lal14g1874 398 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 59 393 - -
Lal14g1874 398 SMART ring_2 335 375 IPR001841 -
Lal14g1874 398 ProSiteProfiles Zinc finger RING-type profile. 335 376 IPR001841 -
Lal14g1874 398 SUPERFAMILY RING/U-box 319 382 - -
Lal14g1874 398 CDD RING-H2_RNF126_like 335 376 - -
Lal14g1874 398 PANTHER - 59 393 - -
Lal14g1874 398 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 297 382 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1874 Lal-Chr14 18209171 18210367 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g1874 18 382 C3H Transcription Factor Family AT5G60820 37.143 9.65e-55 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1874 - - adu:107469048 426.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1874 14 18209171 18210367 Lal14g1874 14 18209171 18210367 ECH
Lal14g1874 14 18209171 18210367 Lal7g1332 7 18544675 18545769 LSH