Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1869 ATGCCTTCGTTCCACCTTCTCCTTCCTCTTCCGTTTCCGCATTCGAAGTTTCGCCTTCATCTCTGTTTTTCGTTCGATCCGCTATATCGGTTAGTTCGATTTTCTTTCTGTTCCGTTTACGTCGCTATTTTTCAGATCTGCGATTTCCTTCTTCAATTTCGTTTGTATTTTTGTGCGTTAACTGTTTTTTCGTTGGATTGGATTTTAGGTTCAATCATGGAGCCCATGGACATCGTTGGCAAATCGAAGGAAGATGCGTCGCTTCCTAAAGCTACAATGACAAAAATCATTAAAGAGATGTTGCCCCCAGATGTACGTGTTGCAAGAGATGCTCAAGATCTATTGATTGAGTGTTGTGTAGAGTTTATAAATCTAGTCTCATCAGAGTCCAATGAAGTCTGTAGCAGAGAGGAAAAACGGACGATAGCACCTGAACACGTATTGAAGGCTTTGGAGGTACTTGGATTTAGTGAGTACATTGAAGAAGTATATGCAGCGTACGAACAGCACAAGCTGGAGACAATGGATACTCTAAAAGCTGGCAAGTGGAGCAATGGAGCTGAGATGACCGAGGAAGAAGCATTAGCAGAGCAGCAAAGGATGTTTGCAGAGGCACGTGCTAGGATGAACGGTGGGGCAGTTGCTCCCAAACAGCCAGATGACTGTTTTGGATTTAATGTGAATTTTCTGGACAGCGTAATAGGATTTAGTACTTGTGCTTGTGGGAACATATACAATGAGGTGTCAGGTCGTAGATACGGTACAAAGAAAGAATCATCTACTCCAACTCAAAAGCCCAACAACATTCCTTCACTCGCTCTCTCACTTATAAACCCCGTTTTCATTCCTGAGATGAAGACACCAGTAATCATGGATACAGCAACCCCAACCCCTCAATCTCAACACTTGTCCTCCAACACCCACTTCCATTGGCCAAACAACAATAACAACAAGGTTGTAAATGAAGACTCTCAACCTCAACTTCCCACAATCATAGAAAAGGAAAATACTTCAACAACAGAAGAGGATCACAAGACCAATAACAATAACATCAACAAAGTTGTTCCACTTCCAGGACATGCACCCACCACAAGGAAGAAGCTTCAGGCAGTGGCTATCTCCAAGGTTCGTTCTGTTCTCACTGTCTTTTCTAAAAATCGTTCCAACAGCAACATATCCTTTGGTCTTGGTTCTCGTGTAGTTGGCACACTCTTCGGATATCGTCGTGGCCATGTCCATATCGCGTTTCAAAAGGACCCAATTTCACAACCCGCTTTCCTCATCGAGCTTGCAACCCCAATCACCGGTTTGGTTCGTGAAATGGCTTCTGGGTTGGTCAGAATTGCCCTCGAGTGTGACAAACAGAAGAAAGAAGCAACAGAGAAGAAAGGTAGTGGTACTAGTGTGATGAGGTTGCTTCAGGAACCTCTTTGGAGGACATATTGCAATGGCAAAAAATGTGGCTTTGCAAGTAGAAGAGAATGTGGGGCAAAAGAGTGGGATATTCTGAAAGCAGTTGAGCCAATTTCAATGGGTGCTGGTGTTTTGCCAGCAGGGAATAATGATAAAGATAAAGAGAGTGATGGCAGTGGTGAAGTGATGTACATGAGGGCAAGGTTTGAGAGAATTGTTGGGTCTAGAGACTCTGAGGCTTTCTACATGATGAATCCTGACAGCAATGGAGCACCTGAGCTCACAGATGCAATTGTCGCTGTAATGTGGTTGCGAAGACAGTCAAAATCACAACATTATGTTCTCAATTGTGGTTATTCTTATTCCTATACTACCTTGTTTAGTTTAGCTCTTCAATCATGGAAATGGAGACCTAGTTCTCCTCTCCAGGTTTTTCCTTTTGTTGTTCCACTCTTCTTCTTGGAGATAGAAGGAGTGTGTTCTCTGCTTCGTTTTGTTGTTAGAATAGAGGGAAGGTTTTGGATGATAGCTTCATTTGAGTGCCCTTTTATTTATTTCTTGTTGATGCCCTTCTTTCCCAGACCTTCTGTACCAAAGAACGTCCTCAAGTCTGTTTCTATTTTTACTTCATTTCGATTGGTCTGGGACATGCTTGAGGACGTGTTTAGGAGAGCAAATCCTTATCCTTCTTTCCCTGTTTAA 2115 0.4284 MPSFHLLLPLPFPHSKFRLHLCFSFDPLYRLVRFSFCSVYVAIFQICDFLLQFRLYFCALTVFSLDWILGSIMEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNEVCSREEKRTIAPEHVLKALEVLGFSEYIEEVYAAYEQHKLETMDTLKAGKWSNGAEMTEEEALAEQQRMFAEARARMNGGAVAPKQPDDCFGFNVNFLDSVIGFSTCACGNIYNEVSGRRYGTKKESSTPTQKPNNIPSLALSLINPVFIPEMKTPVIMDTATPTPQSQHLSSNTHFHWPNNNNNKVVNEDSQPQLPTIIEKENTSTTEEDHKTNNNNINKVVPLPGHAPTTRKKLQAVAISKVRSVLTVFSKNRSNSNISFGLGSRVVGTLFGYRRGHVHIAFQKDPISQPAFLIELATPITGLVREMASGLVRIALECDKQKKEATEKKGSGTSVMRLLQEPLWRTYCNGKKCGFASRRECGAKEWDILKAVEPISMGAGVLPAGNNDKDKESDGSGEVMYMRARFERIVGSRDSEAFYMMNPDSNGAPELTDAIVAVMWLRRQSKSQHYVLNCGYSYSYTTLFSLALQSWKWRPSSPLQVFPFVVPLFFLEIEGVCSLLRFVVRIEGRFWMIASFECPFIYFLLMPFFPRPSVPKNVLKSVSIFTSFRLVWDMLEDVFRRANPYPSFPV 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1869 704 SUPERFAMILY Histone-fold 84 213 IPR009072 GO:0046982
Lal14g1869 704 TIGRFAM A_thal_3588: uncharacterized plant-specific domain TIGR01570 400 566 IPR006460 GO:0010274
Lal14g1869 704 PANTHER PROTEIN MIZU-KUSSEI 1 288 566 IPR006460 GO:0010274
Lal14g1869 704 Gene3D Histone, subunit A 76 213 IPR009072 GO:0046982
Lal14g1869 704 Pfam Protein of unknown function, DUF617 400 566 IPR006460 GO:0010274
Lal14g1869 704 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 86 151 IPR003958 -
Lal14g1869 704 PANTHER DUF617 FAMILY PROTEIN 288 566 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1869 Lal-Chr14 18177972 18184384 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g1869 73 220 CCAAT-DR1 Transcription Factor Family AT5G23090 85.235 1.54e-82 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Lal14g1869 DUF617 1.8e-64 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1869 - - gmx:100808788 362.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1869 14 18177972 18184384 Lal14g1869 14 18177972 18184384 ECH
Lal14g1869 14 18177972 18184384 Lal7g1318 7 18484574 18486737 LSH