Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1868 ATGTTTTGTCTTTGTAATGGCCAAGATTCTTCACTTTCACCAATGGAAATAAAAGAGAAGGAAGCCATCTATTCTGTCATTCAAGGGTTTGTTGGAAAATGGTGGAATGGTTCAGATCTTTATCCAGACCCTTGTGGATGGACTCCCATACAGGGAGTTTCTTGTGAACAATATGATGATGGCTTCTGGTATGTTACTGCAATAAACCTTGGACCAGTTTTTGATAACTCTCTCACATGCAGCCATGATGCCAAATTCCCTGAACAACTATTCAATCTCAAGCACCTAAAAGTTCTCTCACTATACAGTTGCTTCCTTTCTCCGAGCCAAAATCCAGTTAAACTCCCTTTTTCAAACTGGGACAAGTTCTCAAACAATTTGGAATCTTTGACAATTAGATCAAATCCTGGCCTTGTTGGAACCATTCCATCCAAATTTGGCAGCCTTAGGAACCTTCAATCTTTGGTGCTGCTAGAAAATGGTCTAACAGGTAAACTACCACCAAGTATTGGTAATTTGGTGAAACTGAGGCAACTGGTCCTTGCAGGAAATGAATTGGTTGGTGAGGTTCCAGTCAATTGTGGAAGGTTTCCTGAGCTTTTAATATTTGATGCAAGCAGGAATAATCTATCAGGTGCATTACCATCAACATTTGGATTTTTGGATTCACTTCTAAAACTTGATTTGAGCAACAATATGTTTGAAGGAGAGTTGCCTAGGGAGCTAGGAAGGCTAAAGAATCTTACCTTATTGGACATTAGTCATAACAAACTTAGAGGTGGGTTGGCTAGGACACTTAAAGAATTGGAATCCATAAAGGATTTGGTTTTGTCTAATAATCCAATAGGTGGTGATCTCTTTGGAATTAAGTGGAATATTTTCCAAAATATAGAAACTTTGGACCTTTCTAACATAGGTTTGGTAGGGGGTGTACCTGAGTCCATGGCACAAATGAAAAGACTTAGATATTTGGACCTAAGTAACAATAATCTTTCTGGAAGTGTCCCTAAGAGTTTGGAAAATTTGCCATGTCTTGGAGCTCTTCATATAAATGGAAATAATTTGACAGGGAAACTTGACTACTCAGAAGGGTTTTACATGAAAATGGGAAGGCATTTGACAGCTTGGAAAAACTCAAATCTCTGCTACATTACCAAATCAACATCCCAAATACCTTATGGGAGCTCCCTTCCTACAAATCCAAATATGGTTGCTCTCTTCAAAGCCTCATTCCCATTTTTCCTTTGCTTCATTCTTTTTTGTGTAGTGAATTGCACTGAGTTTGAAGTTGGGGGTAAGGATGGCTGGGTTATCCCCAAGTTCAAAGACCATGATCAGATGTACAACCAGTGGGCATCCCAAAACAGATTCAGAGTTGGTGACACTGTTGTTTTCAAGTACAAGAAAGACTCGGTTATGGGGGTGACAGAAGAAGAGTATGACAAATGTAGATCATCTCATCCTCTCTTTTTCTCAAACGATGGTAACACTGTTATCAGATTTATCAGGCCAGGCTTGTTCTACTTCATAAGTGGTGTTAGTGGTCATTGTAACAGAGGGCAGAAGATGATTATTAAGGTTTTGGATATAATGCCAGCAACCCCACCTGAATCTCAATCAGCAAATGAGACTGCAACAAAATCACATCATAAAGGTGGAGCTGCTGAAATAACTCCTATGACTTTAACAACATTGGCACCTTTTGTTCTCTCATTCTTCGCCATGCTTTTTGCTTGA 1737 0.3926 MFCLCNGQDSSLSPMEIKEKEAIYSVIQGFVGKWWNGSDLYPDPCGWTPIQGVSCEQYDDGFWYVTAINLGPVFDNSLTCSHDAKFPEQLFNLKHLKVLSLYSCFLSPSQNPVKLPFSNWDKFSNNLESLTIRSNPGLVGTIPSKFGSLRNLQSLVLLENGLTGKLPPSIGNLVKLRQLVLAGNELVGEVPVNCGRFPELLIFDASRNNLSGALPSTFGFLDSLLKLDLSNNMFEGELPRELGRLKNLTLLDISHNKLRGGLARTLKELESIKDLVLSNNPIGGDLFGIKWNIFQNIETLDLSNIGLVGGVPESMAQMKRLRYLDLSNNNLSGSVPKSLENLPCLGALHINGNNLTGKLDYSEGFYMKMGRHLTAWKNSNLCYITKSTSQIPYGSSLPTNPNMVALFKASFPFFLCFILFCVVNCTEFEVGGKDGWVIPKFKDHDQMYNQWASQNRFRVGDTVVFKYKKDSVMGVTEEEYDKCRSSHPLFFSNDGNTVIRFIRPGLFYFISGVSGHCNRGQKMIIKVLDIMPATPPESQSANETATKSHHKGGAAEITPMTLTTLAPFVLSFFAMLFA 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1868 578 Gene3D Ribonuclease Inhibitor 289 389 IPR032675 -
Lal14g1868 578 ProSiteProfiles Leucine-rich repeat profile. 320 343 IPR001611 GO:0005515
Lal14g1868 578 CDD OsENODL1_like 426 528 IPR041846 -
Lal14g1868 578 Pfam Plastocyanin-like domain 445 521 IPR003245 GO:0009055
Lal14g1868 578 Pfam Leucine rich repeat 126 186 IPR001611 GO:0005515
Lal14g1868 578 Pfam Leucine rich repeat 206 258 IPR001611 GO:0005515
Lal14g1868 578 Pfam Leucine rich repeat 296 355 IPR001611 GO:0005515
Lal14g1868 578 PRINTS Leucine-rich repeat signature 248 261 - -
Lal14g1868 578 PRINTS Leucine-rich repeat signature 318 331 - -
Lal14g1868 578 PANTHER RECEPTOR-LIKE PROTEIN 14 7 571 - -
Lal14g1868 578 SUPERFAMILY Cupredoxins 425 528 IPR008972 -
Lal14g1868 578 SUPERFAMILY L domain-like 106 384 - -
Lal14g1868 578 Gene3D - 425 530 IPR008972 -
Lal14g1868 578 PANTHER PIRIFORMOSPORA INDICA-INSENSITIVE PROTEIN 2-LIKE 7 571 - -
Lal14g1868 578 ProSiteProfiles Phytocyanin domain profile. 426 529 IPR003245 GO:0009055
Lal14g1868 578 SMART LRR_sd22_2 245 271 - -
Lal14g1868 578 SMART LRR_sd22_2 318 344 - -
Lal14g1868 578 Gene3D Ribonuclease Inhibitor 191 288 IPR032675 -
Lal14g1868 578 SMART LRR_typ_2 221 245 IPR003591 -
Lal14g1868 578 SMART LRR_typ_2 173 197 IPR003591 -
Lal14g1868 578 SMART LRR_typ_2 318 341 IPR003591 -
Lal14g1868 578 Gene3D Ribonuclease Inhibitor 18 190 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1868 Lal-Chr14 18171707 18175636 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g1868 414 576 Phytocyanin Superfamily AT1G48940 48.503 4.00e-51 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1868 - - gsj:114411748 818.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1868 14 18171707 18175636 Lal14g1868 14 18171707 18175636 ECH