Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1863 ATGTATTCCTCAAATAGCCCCATCAACGGCAATGACCTAATCCCCTACCCTATCCATTTTTGCTCCTCTGGGCCTTTTTACATTGAAAGCAACCCATCCTCAACACAGGAAACAACCACTTCTGCCTTTCCTTCTCCTCCTTTGTCCTTTTTTCAATTCAAATATGATCCTTTTGAAGACCATGAAATTTTGCTTGAACAACAACAATGCCATGACTTTCTTCATCAGCAACAATCTCTAGCTGATGATGAGACTGTTAATGTTAACATGGAGAATAATACTATTATCCTTGATCACAAAGCAGGACAAGGTACGGATCCGCAGATTCCAATAAGAAGATTTAGCAAGAGAGATCGACATAGTAAGATTAATACAGCTAAAGGAATGAGGGATCGAAGAATGAGATTGTCTCTTTTAGTTGCGAAGAGGTTTTTCGGTCTGCAAGACATGTTAGGCTTTGACAAAGCCAGCAAAACTGTGGACTGGTTGCTGAACCAAGCAAAAGTTGAGATCGAGCAACTAGCAAGGGAGAAGAATATTCATCATCATTATGATGTCAAGAGTGCATCTTCAACTTCAGAATGTACTGAAGCTGTGTCAAGCTTGGATGAGGTTGCAGTTATTGGAAACCAGGAACAAGTTAAGGGAGTAACAAAGGTAAGAAGAGCTAAGCTTTGTAAAAAGAGTGAATTCAAGCATGTTTGTAAGGAATCAAGGGAAAAGGCAAGAGAAAGAGCAAGAGAAAGGACCCAAAAAAAGATAAAGACTGGCGATCAGATGCTAGCTGAAGCTGATGAATCAAAGGAATGTAACAAGGCATCAAACAATAATCTTAACAGCTTAGGTTCTTGGAATCCCTTTGAAACTGTAGAAGAATGTGCATATACTCAGATCCAAAGTGTTAATCCCTCCTTGGATGTGCTTACTCATGGGATCAAAGAACGGAGTTCTCAAGCAAAGGGGCATTTAGGAAGTGTAGAGGATATAGAGCATGAAGATTCTTTGGTGACTATGAGCATATGGAACCCAACCATGATTTTCAATTATTCCTTGTGTAACTCAGGAATATTCCAAGAGCATCAATTTCCAGAATTTCAGTCCATTATGGGAAAACCTTGGGAGTTGGGAGGCTTACAACAATCACAACATCTAATCTACGACCATCACGATTGCACCCATCCTCTTTGTATGTGA 1194 0.3987 MYSSNSPINGNDLIPYPIHFCSSGPFYIESNPSSTQETTTSAFPSPPLSFFQFKYDPFEDHEILLEQQQCHDFLHQQQSLADDETVNVNMENNTIILDHKAGQGTDPQIPIRRFSKRDRHSKINTAKGMRDRRMRLSLLVAKRFFGLQDMLGFDKASKTVDWLLNQAKVEIEQLAREKNIHHHYDVKSASSTSECTEAVSSLDEVAVIGNQEQVKGVTKVRRAKLCKKSEFKHVCKESREKARERARERTQKKIKTGDQMLAEADESKECNKASNNNLNSLGSWNPFETVEECAYTQIQSVNPSLDVLTHGIKERSSQAKGHLGSVEDIEHEDSLVTMSIWNPTMIFNYSLCNSGIFQEHQFPEFQSIMGKPWELGGLQQSQHLIYDHHDCTHPLCM 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1863 397 ProSiteProfiles TCP domain profile. 116 174 IPR017887 -
Lal14g1863 397 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 50 339 IPR005333 GO:0003700
Lal14g1863 397 Pfam TCP family transcription factor 115 255 IPR017887 -
Lal14g1863 397 PANTHER TRANSCRIPTION FACTOR TCP18 50 339 - -
Lal14g1863 397 ProSiteProfiles R domain profile. 236 253 IPR017888 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1863 Lal-Chr14 18152958 18154429 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g1863 106 250 TCP Transcription Factor Family AT3G18550 43.636 7.95e-28 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lal14g1863 TCP 9.3e-43 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1863 - - lang:109345082 480.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g1717 13 16799802 16801271 Lal14g1863 14 18152958 18154429 ECH
Lal24g1302 24 14355925 14357941 Lal14g1863 14 18152958 18154429 ECH
Lal6g1641 6 19134796 19136403 Lal14g1863 14 18152958 18154429 ECH
Lal22g1320 22 16025288 16026476 Lal14g1863 14 18152958 18154429 ECH
Lal14g1863 14 18152958 18154429 Lal14g1863 14 18152958 18154429 ECH
Lal14g1863 14 18152958 18154429 Lal7g1307 7 18425551 18427032 LSH
Lal14g1863 14 18152958 18154429 Lal19g1416 19 16864961 16866872 LSH