Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1852 ATGGAGTTTAGTGTTTGGGCCAATGGCAGAGAGAGTGGTGTGTGTAATGTGTTATGTGTACCTTACAAAACCTCTACCCTCTACCATTTCCCCCACAATTCCCTTTCTTTTTATGGCATTTCGCCGGAAAATCCCTTCCACATTCTCTTCTCCTCTTCATTAATGAAACAACGAAACACTCACCTAATGGCGCTGATAATTTTCCTCCTCCTCCTCCTTTCGCATCATGAACTTAGTTTCCGAGTCAATTCAGAGCCAACTCAGGACAAGCAAGCTCTCCTTGCTTTCATTTCTAAAACCCCACACGCTAACCGTCTCAAATGGAACTCTTCTGGATCCGCTTGCAACTGGGTTGGAGTACAATGTGATTCAACTAACTCCTACGTTTATTCATTACGTTTACCCGGCGTTGGTCTCGTTGGTCAGATCCCAACCAACACCATTGGTCGTCTCACTCAGCTTCGTATCCTTAGTCTTCGCTCCAACGGTCTCAATGGTCAGATCCCCTCTGATTTTTCCAATCTCATTTTCCTTCGCAGTCTCTACCTTCAAAATAATGTCTTCTCCGATGAGTTCCCACTGAGTCTCACTCGACTCACTCGTTTAACTCGCTTGGATCTCTCTTCTAATAACTTCTCTGGCACGATCCCTTTCGCTATCAACAACTTAACCCATCTCACTGGTCTCTTCTTGGAGAACAATACCTTCTCTGAAACCCTCGCCAAATTCCCCTCGTCTTCTTTCGCTGGAAATTTAGATCTCTGTGGTGGTCCTTTAAAGCCATGCAAGTCGTTTTTTCCGGGACCGGCGCCGTCACCAGAGGCTACAGTTCCGTCAAACGCGGTCCACAAGAAGTCTAAGAAGCTTTCCACCGGTGCCATTATCGGAATTGTGGTAGGGTGTGTAGCGGGTGCGTTGTTACTGCTGCTGCTTCTGTTGTTTTGTTTACGGAAGCGGCAGCGCGGTCAACCACCGAAGCCGGCAAAGCCAGTATCAACGGCAGCTCGTAGTGTGCCTACGGCGGAAGCAGGAACGTCGTCGTCGAAGGATGATATAACGGGTGGGTCAATGGAGGCAGAGAGGAACAAGCTGGTGTTTTTGGAAGGAGGAATATATAGCTTCGATTTGGAGGATCTGCTTCGTGCTTCGGCGGAGGTATTAGGGAAAGGAAGTGTGGGGACTTCGTATAAAGCGTTATTGGAAGAAGGGACGACGGTGGTGGTGAAGCGGTTAAAGGATGTGGTAGTTACAAAGAAAGAGTTCGAGATGCAAATGGAGATGTTGGGAAAGATTAAACACGAGAATGTGGTTCCTCTTAGAGCTTTCTACTTCTCCAAAGATGAGAAATTGCTTGTTTATGATTACATCACTGCTGGTAGCTTGTCTGCGCTTCTTCACGGGAGCAGAGGGTCTGGGCGAACACCTCTAGATTGGGATAGCAGAATGAGAATAGCACTAGGGGCTGCAAGAGGGGTTGCATGCCTCCACATCTCAGGCAAGGTGGTTCACGGCAACATCAAATCTTCGAATATACTCCTCCGGGGACCCGACAACGATGCAAGCGTTTCAGATTTTGGCCTCAACCCATTGTTTGGTAACGGAGCCCCATCTAACCGTGTTGCCGGTTATCGAGCTCCAGAGGTATTAGAGACTCGTAAGGTAACATTCAAGTCTGACGTGTACAGCTATGGAGTGTTGCTGTTGGAATTATTAACTGGGAAGGCACCCAACCAAGCTTCACTGGGTGAAGATGGCATTGACCTCCCCAGGTGGGTGCAGTCAGTGGTTCGTGAAGAGTGGACAGCAGAGGTGTTCGACGCTGAGCTCATGAGGTTCCATAACATAGAAGAGGAAATGGTTCAGCTGTTGCAGATTGCAATGGCTTGTGTTTCGGTGGTGCCTGATCAGAGGCCAAGCATGGAGGAAGTGGTGCGCATGATTGAGGACATGAATAGGGGAGAGACTGATGATGGTTTAAGACAGTCCTCTGATGATCCTTCTAAAGGATCTGAAGGTCACACCCCACCCCCTGAGTCAAGGACACCACCTAGGTCCACACCTTAA 2064 0.484 MEFSVWANGRESGVCNVLCVPYKTSTLYHFPHNSLSFYGISPENPFHILFSSSLMKQRNTHLMALIIFLLLLLSHHELSFRVNSEPTQDKQALLAFISKTPHANRLKWNSSGSACNWVGVQCDSTNSYVYSLRLPGVGLVGQIPTNTIGRLTQLRILSLRSNGLNGQIPSDFSNLIFLRSLYLQNNVFSDEFPLSLTRLTRLTRLDLSSNNFSGTIPFAINNLTHLTGLFLENNTFSETLAKFPSSSFAGNLDLCGGPLKPCKSFFPGPAPSPEATVPSNAVHKKSKKLSTGAIIGIVVGCVAGALLLLLLLLFCLRKRQRGQPPKPAKPVSTAARSVPTAEAGTSSSKDDITGGSMEAERNKLVFLEGGIYSFDLEDLLRASAEVLGKGSVGTSYKALLEEGTTVVVKRLKDVVVTKKEFEMQMEMLGKIKHENVVPLRAFYFSKDEKLLVYDYITAGSLSALLHGSRGSGRTPLDWDSRMRIALGAARGVACLHISGKVVHGNIKSSNILLRGPDNDASVSDFGLNPLFGNGAPSNRVAGYRAPEVLETRKVTFKSDVYSYGVLLLELLTGKAPNQASLGEDGIDLPRWVQSVVREEWTAEVFDAELMRFHNIEEEMVQLLQIAMACVSVVPDQRPSMEEVVRMIEDMNRGETDDGLRQSSDDPSKGSEGHTPPPESRTPPRSTP 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1852 687 Gene3D Phosphorylase Kinase; domain 1 349 455 - -
Lal14g1852 687 PANTHER OS05G0480400 PROTEIN 76 238 - -
Lal14g1852 687 PANTHER OS05G0480400 PROTEIN 239 668 - -
Lal14g1852 687 SUPERFAMILY Protein kinase-like (PK-like) 385 647 IPR011009 -
Lal14g1852 687 Gene3D Transferase(Phosphotransferase) domain 1 456 668 - -
Lal14g1852 687 Pfam Leucine rich repeat N-terminal domain 87 123 IPR013210 -
Lal14g1852 687 Gene3D Ribonuclease Inhibitor 86 263 IPR032675 -
Lal14g1852 687 MobiDBLite consensus disorder prediction 338 353 - -
Lal14g1852 687 MobiDBLite consensus disorder prediction 648 667 - -
Lal14g1852 687 Pfam Protein kinase domain 384 645 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal14g1852 687 MobiDBLite consensus disorder prediction 648 687 - -
Lal14g1852 687 SUPERFAMILY L domain-like 92 243 - -
Lal14g1852 687 PANTHER OS05G0588300 PROTEIN 76 238 - -
Lal14g1852 687 PANTHER OS05G0588300 PROTEIN 239 668 - -
Lal14g1852 687 CDD STKc_IRAK 387 650 - -
Lal14g1852 687 ProSiteProfiles Protein kinase domain profile. 381 650 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal14g1852 687 MobiDBLite consensus disorder prediction 321 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1852 Lal-Chr14 18091203 18094139 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g1852 89 668 Receptor kinase-like Gene Family AT5G58300 52.769 0.0 584
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lal14g1852 Pkinase 1.7e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1852 - - gmx:100806857 934.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1852 14 18091203 18094139 Lal14g1852 14 18091203 18094139 ECH
Lal14g1852 14 18091203 18094139 Lal7g1294 7 18323178 18326611 LSH
Lal14g1852 14 18091203 18094139 Lal19g1407 19 16784502 16787279 LSH