Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1849 ATGGAGAAGAAAAAAGTGGCGGTTCCGCTCGTGTGCCACGGTCACTCTCGCCCAGTGGTCGATCTCTTTTACAGTCCTGTTACCCCCGATGGTTTCTTCCTCATCAGCGCAAGCAAGGATTCTAGCCCTATGCTTAGAAATGGAGAGAGTGGGGATTGGATTGGAACATTTCAAGGCCACAAAGGTGCCGTATGGAGTTGCTGCTTGGATACCAATGCCTTACGTGCTGCATCTGCTTCTGCTGATTTCTCAACGAAAGTTTGGGACGCATTAACAGGGGATGAGTTGCACTCTTTCGAGCATAAGCACATTGTTCGAGCATGTGCTTTTTCTGAGGATACACACCTCTTGCTAACTGGAGGAGTAGAGAAAATTCTCCGAATCTATGATATGAATCGGCCTGATGCGCCACCCAGAGAAGTGGATAAATCCCCTGGTTCAGTCAGAACTGTTGCATGGCTTCACAGTGACCAGACAATATTGAGTTCTTGCAGCGACATGGGAGGTGTCAGGTTATGGGATGCAAGGAGTGGTAAAATAGTCCAGACACTGGAGACCAAGTCATCTGTGACAAGTGCTGAAGTGAGTCAGGATGGACATTATATTACAACAGTTGATGGTTCCACTGTCAAGTTTTGGGATGCAAATCACTATGGATTGGTGAAGAGCTATGATATGCCCTGCACCATGGAATCAGCTTCATTGGAGCCCAAGTACGGGAACAAGTTTGTTGCTGGGGGAGAAGACATGTGGATTCATGTTTTTGATTTCCATACAGGCAATGAGATTGCATGCAACAAGGGCCACCATGGTCCTGTCCACTGTGTCCGTTTCTCTCCTGGAGGAGAATCATATGCCTCAGGATCTGAGGATGGGACCATCAGAATATGGCAGACGCCATTGTCTCATGATGCAGCATCGGAGGCCTTATCTGCAAATGAAGCAATTGAAAAGGTGATGAAGATAAGTGCAGATGAGGTTTCACACAAAATTGAGAGTTTTCATATTGCAGATGAGGGGAAATCCGAAGAGAATGAACAGGCTGGGGAGTAA 1053 0.4691 MEKKKVAVPLVCHGHSRPVVDLFYSPVTPDGFFLISASKDSSPMLRNGESGDWIGTFQGHKGAVWSCCLDTNALRAASASADFSTKVWDALTGDELHSFEHKHIVRACAFSEDTHLLLTGGVEKILRIYDMNRPDAPPREVDKSPGSVRTVAWLHSDQTILSSCSDMGGVRLWDARSGKIVQTLETKSSVTSAEVSQDGHYITTVDGSTVKFWDANHYGLVKSYDMPCTMESASLEPKYGNKFVAGGEDMWIHVFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTPLSHDAASEALSANEAIEKVMKISADEVSHKIESFHIADEGKSEENEQAGE 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1849 350 Pfam WD domain, G-beta repeat 54 89 IPR001680 GO:0005515
Lal14g1849 350 Pfam WD domain, G-beta repeat 94 130 IPR001680 GO:0005515
Lal14g1849 350 Pfam WD domain, G-beta repeat 265 297 IPR001680 GO:0005515
Lal14g1849 350 Pfam WD domain, G-beta repeat 179 214 IPR001680 GO:0005515
Lal14g1849 350 PANTHER OS02G0205400 PROTEIN 1 346 - -
Lal14g1849 350 SMART WD40_4 5 47 IPR001680 GO:0005515
Lal14g1849 350 SMART WD40_4 92 130 IPR001680 GO:0005515
Lal14g1849 350 SMART WD40_4 134 174 IPR001680 GO:0005515
Lal14g1849 350 SMART WD40_4 217 256 IPR001680 GO:0005515
Lal14g1849 350 SMART WD40_4 177 214 IPR001680 GO:0005515
Lal14g1849 350 SMART WD40_4 50 89 IPR001680 GO:0005515
Lal14g1849 350 SMART WD40_4 259 298 IPR001680 GO:0005515
Lal14g1849 350 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 266 298 - -
Lal14g1849 350 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT I 1 346 - -
Lal14g1849 350 ProSiteProfiles Trp-Asp (WD) repeats profile. 266 298 IPR001680 GO:0005515
Lal14g1849 350 CDD WD40 14 298 - -
Lal14g1849 350 ProSiteProfiles Trp-Asp (WD) repeats profile. 57 98 IPR001680 GO:0005515
Lal14g1849 350 Gene3D - 9 323 IPR015943 GO:0005515
Lal14g1849 350 SUPERFAMILY WD40 repeat-like 5 299 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1849 Lal-Chr14 18074469 18082702 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g1849 9 296 Eukaryotic Initiation Factors Gene Family AT2G46290 28.221 8.49e-40 142