Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1834 ATGTCTCAATCCCGTTACGTTCCTCCACACCGTGGTAACCCTTCCTTTGCTAGGCCACGTGGCAGAGGTAATGGTCATTTCGGTGGTCGTTGGTTCCCAGACCAAGTATCTTCTTCGTTCCGGAATGATAACTTTGACATTTCGGAGAAGTTTGATGAGCTTGAAGTCATCGGAGAAAGTGAAAACTCCGGCGTCATAAACTTCGACGCATATGAATCGGTGCCGGTGGAGGTTAGCGGGAATAATGTGCCTCCACCGGTGAATAACAGTTTCGGTGAAACGGAGTTGGAGGAAGGGTTGAAGAGGAACATAGAGAGATGCAAGTACGTGAAACCTACACCCATTCAGCGTCACGCTATTCCTATTGCTTCCGCAGGTCGTGACTTGATGGCTTGTGCTCAAACTGGTTCTGGTAAAACGGCAGCGTTTTGTTTTCCTATTATTTCTGGGATTTTGCGCCTCAAGGCTCGTTCCCCTTCAGGGTCTTATTCAATGTTTCGTGGTGGTGGTGGTGCTGCTGTTGCATACCCAACTGCGCTCATTTTGGCTCCTACTAGGGAATTGTCCACTCAGATTCATGATGAAGCCAAGAAATTTGCTTATCAAACTGGGTTGAAGGTTGTCGTTTGTTATGGTGGGGCCCCCGTTAATCAACAGCTACGCAATTTAGAGCGTGGTGTTGACATATTGGTTGCAACTCCTGGGAGGTTGGTGGATTTCATTGAGAGAGAAAGAATTTCACTGTCCAAGATCAAGTATCTTGCATTGGATGAAGCTGATCGTATGTTGGACATGGGTTTTGAACGTCAAATACGAAAGATTGTTCAGCAAATGAACATGCCTCCACCTGGTTCAAGACAGACATTGCTTTTCAGTGCTACTTTCCCCACGGATATACAGAAGCTTGCGTCTGATTTTCTATCAGATTACATATTCCTGTCTGTTGGAAGGGTTGGTTCAAGCACTGAACTCATTCAACAGAAAGTTGTACTTGTTGAGGATGCAGACAAACGAAATTATCTAATGAATCTTCTTCATTCTCAAAGGCCGCGAGGACTCAATGGGAAGAAACCACTGACCCTTGTATTTGTTGAAACTAAGCGGGGTGCTGACAATTTGCAATTCTGGCTGTCTAGAAATGGGTTTGCAGCTACTGCAATACACGGTGACAAAGTTCAAATGGAAAGGGAAAGAGCTCTTAGATCTTTCAAAAGTGGTGATAATCCGATTTTGGTGGCAACTGATGTTGCTTCCCGAGGATTGGATATCCCACTTGTCGCTCATGTTATCAACTTTGATTTGCCTAGAGACATAGATGACTATGTGCATAGGATTGGCAGAACAGGACGTGCTGGTAAGTCTGGTGTAGCCACTGCCTTCTTCAGCCATCAGAACATCCCGATTGCAAAAGCGCTTGTTGCACTCTTGCAGGAAGCAAAACAAGAAGTTCCTTCTTGGCTCAGTGATTACGCTCAATCTTCATCACAGGGTGATCACAACCATCGTTCTCAGCGGTATGGTGCTGGGAAGTATGGTGGCCGTGACTTCAGAAATTTCACTGAACCTAAGGTTGATAATAACAGCTATTTCGGTTCTAATGGCAATGAATATCTTGCCATGGAACCTTATGATACTGTTACATCTCATGGCACCCCAAGTTCCTTTACTGGTTCATCTGATAATATCTCAAAAGCCACTTTTGCTGGCAGCTATCATTACACTGGTGCTAATACTGATTTGGGTTATTCATCCGTTGTTCCCTCTGGCTGGGACTAA 1776 0.4499 MSQSRYVPPHRGNPSFARPRGRGNGHFGGRWFPDQVSSSFRNDNFDISEKFDELEVIGESENSGVINFDAYESVPVEVSGNNVPPPVNNSFGETELEEGLKRNIERCKYVKPTPIQRHAIPIASAGRDLMACAQTGSGKTAAFCFPIISGILRLKARSPSGSYSMFRGGGGAAVAYPTALILAPTRELSTQIHDEAKKFAYQTGLKVVVCYGGAPVNQQLRNLERGVDILVATPGRLVDFIERERISLSKIKYLALDEADRMLDMGFERQIRKIVQQMNMPPPGSRQTLLFSATFPTDIQKLASDFLSDYIFLSVGRVGSSTELIQQKVVLVEDADKRNYLMNLLHSQRPRGLNGKKPLTLVFVETKRGADNLQFWLSRNGFAATAIHGDKVQMERERALRSFKSGDNPILVATDVASRGLDIPLVAHVINFDLPRDIDDYVHRIGRTGRAGKSGVATAFFSHQNIPIAKALVALLQEAKQEVPSWLSDYAQSSSQGDHNHRSQRYGAGKYGGRDFRNFTEPKVDNNSYFGSNGNEYLAMEPYDTVTSHGTPSSFTGSSDNISKATFAGSYHYTGANTDLGYSSVVPSGWD 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1834 591 Pfam DEAD/DEAH box helicase 113 302 IPR011545 GO:0003676|GO:0005524
Lal14g1834 591 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 89 117 IPR014014 GO:0003724
Lal14g1834 591 CDD SF2_C_DEAD 325 461 - -
Lal14g1834 591 Gene3D - 46 314 IPR027417 -
Lal14g1834 591 MobiDBLite consensus disorder prediction 490 509 - -
Lal14g1834 591 SMART ultradead3 108 328 IPR014001 -
Lal14g1834 591 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 178 469 IPR027417 -
Lal14g1834 591 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 37-LIKE ISOFORM X1 37 529 - -
Lal14g1834 591 SMART helicmild6 371 452 IPR001650 -
Lal14g1834 591 MobiDBLite consensus disorder prediction 1 28 - -
Lal14g1834 591 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 340 491 IPR001650 -
Lal14g1834 591 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 37 529 - -
Lal14g1834 591 Pfam Helicase conserved C-terminal domain 337 452 IPR001650 -
Lal14g1834 591 Gene3D - 315 495 IPR027417 -
Lal14g1834 591 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 120 313 IPR014001 -
Lal14g1834 591 CDD DEADc_DDX3_DDX4 90 319 IPR044763 GO:0003724|GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1834 Lal-Chr14 18000166 18003586 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g1834 89 489 Eukaryotic Initiation Factors Gene Family AT3G19760 32.338 1.21e-62 210
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1834 14 18000166 18003586 Lal14g1834 14 18000166 18003586 ECH