Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1816 ATGGAGCTTCAACTAGGTCTTGCTCTTCCAACCCATTCTTCTAAACCTCTTAACCATGATTCCTCCCACAATAAGAAACGTAGTTTCTCTAACTTCTTTGACCATGCTGATACCCACAACAATACACAACATGTTATGCTTCCTACTCTATCTCTCCTCTCATTAACGCCTTCCCACTCATGCAACCTTCATCATCTCCTTAGCACCAAGAACGATGGGAATGATGTAGTGGGTTGGCCTCCAGTAAATTCATATAGGAAGAAACTTCGTTATGACAACTATGAGGATCAAATGGTGTGGATTCATCATTATCATTATAGTCGTAGTTCAGTTGGTATGAGAGGAGGATCCAATAGGCTGTACGTTAAGGTGAAGATGGAGGGTAATGGAATTGCAAGGAAGATTAATCTTAACATGCACCATTCATTTGAAACGCTCAAGGAAACCTTGATGGACATGTTTGGAAAATGTCATCAACATTCAAAGTGCTATAAGCTAGCTTATCAGGACCAAGAAGGTGATTGGCTTCTTGCTGATGATGTGCCGTGGAAAAGTTTCACTGAGTGTGCACAACGGCTCAAATTGGTGAAGAACAGCAGATAG 603 0.4129 MELQLGLALPTHSSKPLNHDSSHNKKRSFSNFFDHADTHNNTQHVMLPTLSLLSLTPSHSCNLHHLLSTKNDGNDVVGWPPVNSYRKKLRYDNYEDQMVWIHHYHYSRSSVGMRGGSNRLYVKVKMEGNGIARKINLNMHHSFETLKETLMDMFGKCHQHSKCYKLAYQDQEGDWLLADDVPWKSFTECAQRLKLVKNSR 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1816 200 ProSiteProfiles PB1 domain profile. 119 200 IPR000270 GO:0005515
Lal14g1816 200 Gene3D - 120 200 - -
Lal14g1816 200 PANTHER AUXIN-RESPONSIVE PROTEIN IAA20 1 198 - -
Lal14g1816 200 SUPERFAMILY CAD & PB1 domains 114 195 - -
Lal14g1816 200 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 1 198 IPR003311 GO:0005634|GO:0006355
Lal14g1816 200 Pfam AUX/IAA family 162 199 IPR033389 -
Lal14g1816 200 Pfam AUX/IAA family 20 157 IPR033389 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1816 Lal-Chr14 17893476 17894727 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g1816 119 200 B3 DNA Binding Superfamily AT5G20730 33.721 1.24e-10 58.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Lal14g1816 AUX_IAA 4.1e-19 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1816 K14484 - gmx:100808466 196.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1816 14 17893476 17894727 Lal14g1816 14 17893476 17894727 ECH
Lal14g1816 14 17893476 17894727 Lal7g1246 7 17992618 17993924 LSH