Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1795 ATCTCTGCTGTGACCTTCTTCTGTCTGCAGAAAAACGAGGAGCAACTTGCTTATGATAACACAAGTATCTCATTGCCTTTGCATTGTGATCTTTTGAATAACCAAATGGATAACTGGGAAAAAACTTCATCTTTTACAACTTCCACAATTAATTCACTTCCTTTGGAAAGCATATGTGAGAATTCAGAAATTACTAACAAAAAACAGAACTCCATAAATTTTGTCCCTTCTCTTCGGTCTGGAGAGTGGTCTGATATTGGAGGCCGCCCTCACATGGAAGATACCCACATATGCATTGGAGACTTGGCAAAGAAATTTCATTATGACACACTTTGTGAAGAAACTGTTTCCTTATATGGAGTATTTGATGGACATGGAGGGAAGGCTGCTGCTCAATTCGTCCGTGATCACTTGCCGAGGGTGATTGTTGAGAATGCTGACTTTCCTTTCGAACTCGAGAAGGTAGTCAAGAGGTCATTTATAGAGACTGATGCAGAATTTGCAAAAACATGCTCTATTGAGTCTTCCATGTCTTCTGGTACAACTGCACTCACTGCAATTGTATTTGGAAGGTCTTTACTTGTAGCCAATGCTGGAGATTGCCGAGCTGTTTTATGCCGTAGAGGAAGGGCTATAGAAATGTCGAAAGATCATAGGCCCTATTGCATTAAAGAAAGGAAGCGAATTGAGTCCCTAGGTGGATTTGTTGATGATGGTTACCTGAATGGCCTATTAGGCGTTACTCGTGCTCTAGGTAACTGGCATCTTGAAGGAATGAAAGAAAAGAGCGGAAGCGGCGGACCATTGATTGCTGAGCCTGAACTTAAACTGGTGGCATTGACCAAAGAAGATGAATTATTGATCATTGGTAGTGATGGAATTTGGGATGTATTTCGCAGCCAAAACGCCGTTGATTTTGCTCGAAGGAGGCTCCAAGAACATAATGATGTGAAAAAATGTTGCAAGGAAATGGTTGAGGAAGCAATGAAGAGAGGAGCAACAGATAACTTGACAGTTGTGATGGTATGTTTTCACTCAGATCCACCACCACATATGGTTGTAGAGAGGATGAGAGTCAGGAGAAGTATATCTGCTGAGGGACTTCAGAATCTTAAATGCCTGCTAGAAGGATAA 1134 0.4153 ISAVTFFCLQKNEEQLAYDNTSISLPLHCDLLNNQMDNWEKTSSFTTSTINSLPLESICENSEITNKKQNSINFVPSLRSGEWSDIGGRPHMEDTHICIGDLAKKFHYDTLCEETVSLYGVFDGHGGKAAAQFVRDHLPRVIVENADFPFELEKVVKRSFIETDAEFAKTCSIESSMSSGTTALTAIVFGRSLLVANAGDCRAVLCRRGRAIEMSKDHRPYCIKERKRIESLGGFVDDGYLNGLLGVTRALGNWHLEGMKEKSGSGGPLIAEPELKLVALTKEDELLIIGSDGIWDVFRSQNAVDFARRRLQEHNDVKKCCKEMVEEAMKRGATDNLTVVMVCFHSDPPPHMVVERMRVRRSISAEGLQNLKCLLEG 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1795 377 PANTHER PROTEIN PHOSPHATASE 2C 27-RELATED 16 365 - -
Lal14g1795 377 ProSitePatterns PPM-type phosphatase domain signature. 118 126 IPR000222 GO:0043169
Lal14g1795 377 PANTHER PROTEIN PHOSPHATASE 2C 16 365 IPR015655 GO:0004722|GO:0006470
Lal14g1795 377 SMART PP2C_4 69 342 IPR001932 -
Lal14g1795 377 CDD PP2Cc 79 344 IPR001932 -
Lal14g1795 377 Gene3D - 58 348 IPR036457 -
Lal14g1795 377 ProSiteProfiles PPM-type phosphatase domain profile. 79 344 IPR001932 -
Lal14g1795 377 SUPERFAMILY PP2C-like 68 345 IPR036457 -
Lal14g1795 377 Pfam Protein phosphatase 2C 89 336 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1795 Lal-Chr14 17700442 17705079 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g1795 68 377 PP2C-type Phosphatase Gene Family AT2G25620 58.654 5.92e-134 387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBP Lal14g1795 PP2C 8.8e-68 CL0238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1795 K14803 - gmx:100782648 587.415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1795 14 17700442 17705079 Lal14g1795 14 17700442 17705079 ECH
Lal14g1795 14 17700442 17705079 Lal7g1207 7 17752670 17756472 LSH