Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1792 ATGGCATATAACGAGCATCTAGCATTTCAGGGTTTCACTGAGGAGGAACAAGAGTTAAGTCCTGATGAGAGTACTAGAGGAGGAGGTGGTGGTGGTGACATGCAGCAGCATCAACACCAGCATAGGGTGGTGCCACCGACATGGCTCATCAACAACGCTAACGCCACTCGTCAGCAACAGAATTTCCTTCACTTACAAACTCAGAAGAGCATGGATCGGATGAGTAATTCAGAATCTGAGGATCTTGGAGAATATAAAGCTCATATTTTGGGACACCCACTTTATGATCAACTCTTATCTGCTCATGTTTCGTGTCTTAGAATTGCAACCCCAGTTGACCAGCTTCCTAGGATTGATGCTCAGTTGCAGCACTCGCAGCGCGTGGTGGATAAGTATTCTGCCCTTGCTAATGGGGTCCTCGATCAGAAGGAACTTGATCACTTCATGACACATTATGTTCTGTTGCTCTGTGCATTTAAAGAGCAACTGCAACAACATGTACGTGTTCATGCCATGGAAGCAGTGATGGCTTGTTGGGATCTGGAGCAGTCTCTTCAAAGCTTGACAGGTGTATCTCCTGGTGAAGGAAGTGGTGCAACAATGTCAGATGATGAAGATGAACAGGCAGAGAGCAATGGGAACTTATATGAAGGTAGCATGGAGGGTGGTGATAGTCTTGGCTTTGGTCCTCTTGTTCCTTCCGAAAGTGAAAGATCTTTGATGGAACGAGTGAGGCATGAATTGAAGCATGAACTAAAACAGGGTTACAAGGAGAAGATAGTGGACATAAGAGAAGAAATTCTACGTAAAAGACGAGCAGGGAAGCTTCCAGGGGACACCACGTCCCTATTGAAAGCATGGTGGCAGTCACATTCTAAATGGCCCTACCCTACTGAGGAAGACAAGGCTAGGTTGGTGCAAGAAACAGGCTTGCAATTAAAGCAGATAAATAATTGGTTCATAAACCAAAGGAAAAGGAACTGGCATACTAATCCCACAACCTCTACCACCTCCAAAACCAAGCGCAAGAGCAGCGCAGGTGAAAGCAGTAACCAGAGCTTCATGTGA 1068 0.4579 MAYNEHLAFQGFTEEEQELSPDESTRGGGGGGDMQQHQHQHRVVPPTWLINNANATRQQQNFLHLQTQKSMDRMSNSESEDLGEYKAHILGHPLYDQLLSAHVSCLRIATPVDQLPRIDAQLQHSQRVVDKYSALANGVLDQKELDHFMTHYVLLLCAFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGEGSGATMSDDEDEQAESNGNLYEGSMEGGDSLGFGPLVPSESERSLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHTNPTTSTTSKTKRKSSAGESSNQSFM 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1792 355 MobiDBLite consensus disorder prediction 1 40 - -
Lal14g1792 355 SMART KNOX2_2 135 190 IPR005541 GO:0003677|GO:0005634
Lal14g1792 355 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 33 348 - -
Lal14g1792 355 Gene3D - 268 329 - -
Lal14g1792 355 SMART HOX_1 269 334 IPR001356 GO:0003677
Lal14g1792 355 Pfam ELK domain 247 268 IPR005539 GO:0003677
Lal14g1792 355 ProSiteProfiles 'Homeobox' domain profile. 267 330 IPR001356 GO:0003677
Lal14g1792 355 CDD homeodomain 270 331 IPR001356 GO:0003677
Lal14g1792 355 SUPERFAMILY Homeodomain-like 269 333 IPR009057 -
Lal14g1792 355 Pfam KNOX1 domain 85 126 IPR005540 GO:0003677|GO:0005634
Lal14g1792 355 Pfam KNOX2 domain 141 189 IPR005541 GO:0003677|GO:0005634
Lal14g1792 355 MobiDBLite consensus disorder prediction 190 220 - -
Lal14g1792 355 SMART ELK_2 247 268 IPR005539 GO:0003677
Lal14g1792 355 ProSiteProfiles ELK domain profile. 247 267 IPR005539 GO:0003677
Lal14g1792 355 PANTHER CLASS II KNOTTED-LIKE HOMEOBOX PROTEIN 33 348 - -
Lal14g1792 355 Pfam Homeobox KN domain 287 326 IPR008422 GO:0003677|GO:0006355
Lal14g1792 355 MobiDBLite consensus disorder prediction 324 355 - -
Lal14g1792 355 SMART KNOX1_2 83 127 IPR005540 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1792 Lal-Chr14 17678749 17690016 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g1792 85 350 Homeobox Transcription Factor Family AT5G11060 82.963 5.58e-166 467
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-KNOX Lal14g1792 KNOX2 1.7e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1792 - - gmx:100803673 543.502
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1792 14 17678749 17690016 Lal14g1792 14 17678749 17690016 ECH
Lal14g1792 14 17678749 17690016 Lal4g1379 4 18045188 18055006 PCT
Lal4g1379 4 18045188 18055006 Lal14g1792 14 17678749 17690016 PCT