Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1772 ATGCAAGGCCTAAACAACTCTTCAGAAATGAACAACTTAGATGATGATTTCTTGAAGCAAATTCTATCTACCCTTCCTTCTTCTTCTTGGTCCCTCGATGAAACTTCCAATCTCCCTTTCCCTTCTTCCTTCGATGAACAAACCAACTTGTCTTCTAAATTCCAAAACCATCACATCACTCCTACTTCATCCAATGCCGCTGCTCTCAGTCTCATGCTTCATCAACAGTTTCTCATGTCTAGAGGAACCGCTGCTGACTTTGACTCCTCCCAAAACGACGTCGTTGACGCCTCCTCCTTCAAATCTCCCATTCCGGCTCTGTTCAACGGTTTCTCTGGATCTCTCCACGGCGCTTCCAACCACACTAATCATTTTCAACATCCTCAGGAAATTTTGAAATTTGAACAACAGGGTGAGGGAGGTTCGAATCAGATGCAAGGGCAGAGTTTTGGTGCAACGAACCAAGCTCCAACCGGAGCCACCCCGGCTCAGCCGAAACAGAGGGTTAGGGCTAGGAGAGGTCAAGCCACCGATCCACACAGCATCGCTGAGAGGTTACGAAGGGAAAGAATTGCAGAAAGGATGAAGGCCCTGCAGGAACTGGTTCCCAATGCTAACAAGACAGACAAGGCCTCTATGCTGGATGAGATCATTGACTATGTGAAGTTCCTACAGCTTCAAGTCAAGGTTTTGAGCATGAGCAGATTGGGCGGTGCATCTGCTGTTGCTCCCCTTGTTGCTGATATGTCCTCTGAGGGAGGCGGTGACTGTATCCAAGCCAAAACAAACGGTGGATCCCAACCAAGAAACTCAACGGCGTCGTCCGGCAACGACAGCCTGAGCATGACGGAGCAGCAGGTTGCAAAGCTGATGAAAGAAGACATGGGATCTGCTATGCAATATCTTCAGGGTAAAGGTCTCTGCCTCATGCCAATTTCTCTGGCTACAGCAATATCTACTGCCTCGTGTCACTCTAGGAACCCTTTGATCAATGGTAATCCTAACCCTCTCATCCCATCTAACGCTGATGGCCCACCCTCTCCCGGTATTTCCGTCATGACCGTGCAGTCCGCTATTCTTGGTAACGGTGCCATGGATAACGCCGTCAAAGACTCCACTTCCGTTTCCAAACCCTGA 1137 0.4899 MQGLNNSSEMNNLDDDFLKQILSTLPSSSWSLDETSNLPFPSSFDEQTNLSSKFQNHHITPTSSNAAALSLMLHQQFLMSRGTAADFDSSQNDVVDASSFKSPIPALFNGFSGSLHGASNHTNHFQHPQEILKFEQQGEGGSNQMQGQSFGATNQAPTGATPAQPKQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGASAVAPLVADMSSEGGGDCIQAKTNGGSQPRNSTASSGNDSLSMTEQQVAKLMKEDMGSAMQYLQGKGLCLMPISLATAISTASCHSRNPLINGNPNPLIPSNADGPPSPGISVMTVQSAILGNGAMDNAVKDSTSVSKP 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1772 378 MobiDBLite consensus disorder prediction 137 162 - -
Lal14g1772 378 Pfam Helix-loop-helix DNA-binding domain 180 225 IPR011598 GO:0046983
Lal14g1772 378 MobiDBLite consensus disorder prediction 256 281 - -
Lal14g1772 378 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 173 235 IPR036638 GO:0046983
Lal14g1772 378 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 175 224 IPR011598 GO:0046983
Lal14g1772 378 PANTHER TRANSCRIPTION FACTOR BHLH69 13 333 - -
Lal14g1772 378 SMART finulus 181 230 IPR011598 GO:0046983
Lal14g1772 378 Gene3D - 170 232 IPR036638 GO:0046983
Lal14g1772 378 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 13 333 - -
Lal14g1772 378 MobiDBLite consensus disorder prediction 137 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1772 Lal-Chr14 17578351 17581267 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g1772 158 377 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G24260 64.831 1.56e-92 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lal14g1772 HLH 1.4e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1772 - - qsu:111987215 417.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1772 14 17578351 17581267 Lal14g1772 14 17578351 17581267 ECH