Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1745 ATGACTAGAAGCTTTCTACATGATAAAGGTGATCCCTTTCTGCCTCAATCAGAACAATCATCTTATTTTCTTTCTCAGCCTAATGCACCTTCCCCACCAAATATTCAATCTAATACTTTCAGTTTCAATGATAAGGTTCTAAAGGTTAGTCCAAGTGTACTACTCATTATTATAATTCTAGCTATTGTTTTCTTCATTTCTGGTTTGCTTCACCTCCTTGTTAGATTCCTATGGAGACCTCCACATAGCGACCATGATGATTTGGATAATGTTACTGCACTTCAAGGTCAATTGCAGCAACTTTTCCATCTCCATGATGCTGGGGTTGACCAGTCTTTCATTGATACCCTCCCTGTATTTAATTACAAAGCCATTATAGGATTAAAGAACCCTTTTGATTGTGCTGTTTGTTTGTGTGAATTTGAGCCTGAGGATAAGCTTAGGTTATTGCCAAAATGTAGCCATGCCTTTCACATGGAGTGTATTGATACATGGCTCTTGTCACACTCTACTTGTCCTCTTTGTAGAGCTACCTTGCTTCCCGAGTTTTCCACAAACAATACACGTTCCCCTTTTGTTTTTGTTCTAGAATCCGGGAGTGAGAGTTCCAGGGAGAATGTTTCAGAAATAGAGGGTATTGCTTCTGGTGCTGTTGTTGGAAGGACTAGTTCAGTTATAACAACAAAATCACGTCTTGGTGGTACTGACTTTGGATCAACTAGAACTGATATACCAAGGAAATCAGGTGATTTGATTTTAAATGAGAATCCTATACCTGATCCAACTGTGGTAGGTGATGGTGTGGAAAAAGTTGTGACTGTAAAGCTGGGAAAGTTTAGGAATGTGGATGGTGATGTTGTTGTTAGTGGTGAAGGAAGTAGTAGCACCAACAATGTAGATGATAGAAGATGTTTTTCTATGGGGTCTTTTGCTTATGTTATGGACGAGAGTGCTTCACTTCAGGTACCAATAAGAACACCAATCAAGAAGCAATCAAGTAAGAAGAAGTCTGAGTTGCCATTGACACCAGGACACAGGCCTGCAATGTCTGAATGTTACTTTGAATCTGGAAAAGATTTCAAATTTGCAGGCTTTGATAATATACCTAATAGTAATAGATTAGTTGAGAATGTTGGTTGTAGTGGTAGTGGAGGTGCTGCTATTGGAAGAAGCAGAAAAGAGAGTTTTTCTATATCAAAGATTTGGCTGAGGGGGAAGAAGGAGAAGCCTAATGCCTTGGCTGATTCAACCAGAAGGGCTGTTTCGTTCCGGTATCCGACTGTTGGTAGTGATGATTTGAAGGCCAAGAATGGGAAATTTGACACAAGGAGTACTAATTCGATGGATATTGGGAAATGGGAGAACGGTGGAAGTGAGTTTGGGTATGATGAGGAAAATCAGAGCTGCTACAGTATGGATTCTCAAGCTACAGCAACTTCTTTTGCTAGAAGGACTTTGCTTTGGCTCACTGGAAGACAGAATAAGGTTGTTCACTCATTTTCTGCTTCCAATCTCTAG 1518 0.3999 MTRSFLHDKGDPFLPQSEQSSYFLSQPNAPSPPNIQSNTFSFNDKVLKVSPSVLLIIIILAIVFFISGLLHLLVRFLWRPPHSDHDDLDNVTALQGQLQQLFHLHDAGVDQSFIDTLPVFNYKAIIGLKNPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRATLLPEFSTNNTRSPFVFVLESGSESSRENVSEIEGIASGAVVGRTSSVITTKSRLGGTDFGSTRTDIPRKSGDLILNENPIPDPTVVGDGVEKVVTVKLGKFRNVDGDVVVSGEGSSSTNNVDDRRCFSMGSFAYVMDESASLQVPIRTPIKKQSSKKKSELPLTPGHRPAMSECYFESGKDFKFAGFDNIPNSNRLVENVGCSGSGGAAIGRSRKESFSISKIWLRGKKEKPNALADSTRRAVSFRYPTVGSDDLKAKNGKFDTRSTNSMDIGKWENGGSEFGYDEENQSCYSMDSQATATSFARRTLLWLTGRQNKVVHSFSASNL 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1745 505 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 14 415 - -
Lal14g1745 505 Pfam Ring finger domain 133 176 IPR001841 -
Lal14g1745 505 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE-RELATED 14 415 - -
Lal14g1745 505 SUPERFAMILY RING/U-box 113 189 - -
Lal14g1745 505 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 108 181 IPR013083 -
Lal14g1745 505 CDD RING-H2_PA-TM-RING 133 176 - -
Lal14g1745 505 ProSiteProfiles Zinc finger RING-type profile. 134 176 IPR001841 -
Lal14g1745 505 SMART ring_2 134 175 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1745 Lal-Chr14 17428060 17429577 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g1745 48 498 C3H Transcription Factor Family AT2G18650 47.122 2.14e-97 299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1745 14 17428060 17429577 Lal14g1745 14 17428060 17429577 ECH