Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1742 ATGTTTCTCCTCACCTCCCTCTTCTTCCTCTTCCTTGGATTCGCCGCTTTCCTCCTCCTTCACCTTTTCCTCCTTGGCGGTGCCCTTCACCGCCTCCGCTTCTGCCCCAACCCTAATCCTACTCCCAACCTCAACAATCTTCCCCGCTTTCGCATCTCCGGGGGATCCGAATCCCGTTGCGTTGTCTGCCTCGATGGCTTCCGCAACGGCCAGTGGTGCCGGAAGCTCACCGATTGTGGCCACCTCTTTCACCGTCGGTGCGTTGACACGTGGCTGATCAAGGTCGCGGCGTGCCCTACTTGTCGGACATCTGTTCGATTCAATGCCGACGCGGATGTAGCGATGACTCAGAATGATAGGCAATTTTGGAATTGCGCCACTAACACTAATGCTCTCACAATTATCAAGAAGAATTTGGATGTTAATTGGATAAGGCCTGTGATGGGATCGTGA 453 0.5386 MFLLTSLFFLFLGFAAFLLLHLFLLGGALHRLRFCPNPNPTPNLNNLPRFRISGGSESRCVVCLDGFRNGQWCRKLTDCGHLFHRRCVDTWLIKVAACPTCRTSVRFNADADVAMTQNDRQFWNCATNTNALTIIKKNLDVNWIRPVMGS 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1742 150 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 41 111 IPR013083 -
Lal14g1742 150 PANTHER RING-H2 FINGER PROTEIN ATL56 2 127 - -
Lal14g1742 150 Pfam Ring finger domain 59 102 IPR001841 -
Lal14g1742 150 SUPERFAMILY RING/U-box 50 108 - -
Lal14g1742 150 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 2 127 - -
Lal14g1742 150 SMART ring_2 60 101 IPR001841 -
Lal14g1742 150 ProSiteProfiles Zinc finger RING-type profile. 60 102 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1742 Lal-Chr14 17416094 17421817 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g1742 44 125 C3H Transcription Factor Family AT2G18670 48.276 2.68e-24 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1742 - - var:108321550 144.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1742 14 17416094 17421817 Lal19g1284 19 15960715 15963054 LSH