Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1735 ATGGGAATTGAGAGGGGAGGTCTTATTTTGAGGAGTGGCTGGAGTGTGCCCCCAAAGCTATGCGACTCTTGCAAGTTAGCTTCGGCGACACTCTTCTGCCACCCCGATTCCATGTTTCTCTGCATCCTCTGCGATTCCAAAATTCACTCACTCAACAAACATGGTTCGCGTCACGAACGCGTGTGGATGTGTGAGGTGTGCGAGCAAGCACCTGCAGCTGTCACGTGCAAAGCAGACGCTGCTGCACTATGTGTCACGTGCGATTCAGATATCCACTCCGCTAACCCACTCTCGCAGCGCCACGACCGTGTCCCCGTGGAGCCCTTCTACGACTCTGCTGAGTTCATAGTCAAAGCCTCCGCTGCTAATTTCGGCTTTGTGGTCCCCACCGACGACGGGATTGCTTCAAACAAGCTCAACCAAGATGAGCCATGGCTCATTCCGAACCCTAATTACGGGTCGAAACTCATGGATGCCCCTGATATCAAGTCCAGGGAGATGATCTTCTCTGACATGGATCCCTTTCTTGATTTCGATAACTCAACGAATTTCTTCCATAACACCGGAAACGACAGCGTTGTGCCTGTTCAAACCAAACCCGCTCCTGTCATGATTCACCATAGCTCAGAGGCTTGTTTCGACAACGATTTTTCTAGATCCTCGTTCAACTACACATCACAGTCTATTAGCCAAAGTGTTTCTTCATCTGATGTTGGAGTTGTTCCAGATTCAAGTGGAAAGGATCGTGAAGCGAGGGTAATGAGGTACAGAGAGAAGAGGAAGAATCGAAAGTTTGAGAAAACAATTCGCTACGCTTCACGAAAAGCTTACGCTGAAACCCGGCCCAGGATTAAAGGCCGGTTCGCTAAACGAACCGAAAATGACTCGGAGGTAGACCGTCTTTATAATCCCTCTGGTGTTGTTACTTCTGTTCCTGCAACTTTCATGCTGGACACACAGTACGGCGTCGTACCGTCCTTCTAG 984 0.4959 MGIERGGLILRSGWSVPPKLCDSCKLASATLFCHPDSMFLCILCDSKIHSLNKHGSRHERVWMCEVCEQAPAAVTCKADAAALCVTCDSDIHSANPLSQRHDRVPVEPFYDSAEFIVKASAANFGFVVPTDDGIASNKLNQDEPWLIPNPNYGSKLMDAPDIKSREMIFSDMDPFLDFDNSTNFFHNTGNDSVVPVQTKPAPVMIHHSSEACFDNDFSRSSFNYTSQSISQSVSSSDVGVVPDSSGKDREARVMRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRTENDSEVDRLYNPSGVVTSVPATFMLDTQYGVVPSF 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1735 327 CDD Bbox1_BBX-like 20 63 - -
Lal14g1735 327 SMART bboxneu5 64 106 IPR000315 GO:0008270
Lal14g1735 327 SMART bboxneu5 16 63 IPR000315 GO:0008270
Lal14g1735 327 Pfam CCT motif 249 291 IPR010402 GO:0005515
Lal14g1735 327 Pfam B-box zinc finger 61 106 IPR000315 GO:0008270
Lal14g1735 327 Pfam B-box zinc finger 18 59 IPR000315 GO:0008270
Lal14g1735 327 ProSiteProfiles Zinc finger B-box type profile. 16 63 IPR000315 GO:0008270
Lal14g1735 327 ProSiteProfiles CCT domain profile. 249 291 IPR010402 GO:0005515
Lal14g1735 327 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 11 245 IPR045281 GO:0009909
Lal14g1735 327 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 245 327 IPR045281 GO:0009909
Lal14g1735 327 CDD Bbox1_BBX-like 64 106 - -
Lal14g1735 327 ProSiteProfiles Zinc finger B-box type profile. 59 106 IPR000315 GO:0008270
Lal14g1735 327 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 5 11 245 - -
Lal14g1735 327 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 5 245 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1735 Lal-Chr14 17347733 17349212 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g1735 10 327 C2C2-CO-like Transcription Factor Family AT5G57660 48.883 1.33e-98 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Lal14g1735 zf-B_box 1.5e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1735 - - gmx:100792197 452.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1735 14 17347733 17349212 Lal14g1735 14 17347733 17349212 ECH
Lal14g1735 14 17347733 17349212 Lal7g1137 7 17242109 17243883 LSH