Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1730 ATGGGTAGAGCTCCATGCTGTGACAAGGCTAATGTTAAGAAAGGACCTTGGTCTCCAGAAGAGGATGATGCACTCAAAGAATACATTGAAAAAAATGGAACCGGTGGAAATTGGATTGCTCTTCCTCAGAAAATTGGGATCAAGAGATGTGGAAAGAGTTGTAGGCTTAGGTGGTTGAATTACTTGAGACCTAACATCAAGCATGGTGGATTTACTGAAGATGAAGACAACATCATCTGCAGTCTTTACATTAGCATTGGAAGCAGGTGGTCCATTATTGCAGCACAATTACCTGGAAGGACAGATAATGATATCAAGAACTATTGGAACACAAGGTTGAAGAAGAAGCTGCTTGGGAGGCGCAAACAATCTAACTTCAACACAAAAGAAACAAATGGAATAGAAGAGAATTCATCTAGTAATTCCCTAAGCAATTCTGCTCTTGAAAGACTTCAGCTGCATATGCAACTCCAAAGCCTTCAAAACCCTTTCTCTTTCTACAGTAACTATTCACTGTGGCCTAAGTTGCATCCTTCCCAAGAAAAGGTGATACAGCAATCTTTGAATGACAGCTCTAACTCTAACCCTTTGATGCAAGGACAAAATGATGAGTTCTATAAACCAATTACTGTTATTGGTGATTTACTTCAACAAAATGGTGCAAATATCAATGCTCCAAAGGTAATTGGTCATTTGGAGAATACTTTGAATAATAGTTCAGTTCCCTTCATTGCTAATTCTGGGAATAATACTCCTATGTACTCATCAAGTATTGTTGAGCAAACGACTAATATGGGACTTCAGCAAGCTTGTACACTGCAAATTACTGAACTTGATGACATTCTCAACAATAGAACTACAATGGGTAGTTACTTGCCACAGGAAGAACAGAATATGGCTGAATTTGATTGTTTCAGAGAGATGAATGGTTCAAAGGACAATAGCAGCTTGATTTGGTGGTCCAATGTTTCTGATGCCAAGTCAGCAACCACGAGCTCTTGGGATTCATCAACTACTCCAGCTCTTATGCCAGAAGGAATGTTCCAAGATTATGAACTAGGTTACAGTTTGTAG 1074 0.3911 MGRAPCCDKANVKKGPWSPEEDDALKEYIEKNGTGGNWIALPQKIGIKRCGKSCRLRWLNYLRPNIKHGGFTEDEDNIICSLYISIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLLGRRKQSNFNTKETNGIEENSSSNSLSNSALERLQLHMQLQSLQNPFSFYSNYSLWPKLHPSQEKVIQQSLNDSSNSNPLMQGQNDEFYKPITVIGDLLQQNGANINAPKVIGHLENTLNNSSVPFIANSGNNTPMYSSSIVEQTTNMGLQQACTLQITELDDILNNRTTMGSYLPQEEQNMAEFDCFREMNGSKDNSSLIWWSNVSDAKSATTSSWDSSTTPALMPEGMFQDYELGYSL 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1730 357 CDD SANT 71 113 IPR001005 -
Lal14g1730 357 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Lal14g1730 357 Gene3D - 70 143 - -
Lal14g1730 357 PANTHER OS09G0431300 PROTEIN 1 311 - -
Lal14g1730 357 PANTHER OS09G0431300 PROTEIN 1 311 - -
Lal14g1730 357 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Lal14g1730 357 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Lal14g1730 357 MobiDBLite consensus disorder prediction 120 141 - -
Lal14g1730 357 CDD SANT 16 62 IPR001005 -
Lal14g1730 357 SMART sant 13 64 IPR001005 -
Lal14g1730 357 SMART sant 67 115 IPR001005 -
Lal14g1730 357 MobiDBLite consensus disorder prediction 124 141 - -
Lal14g1730 357 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Lal14g1730 357 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Lal14g1730 357 Gene3D - 7 68 - -
Lal14g1730 357 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Lal14g1730 357 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1730 Lal-Chr14 17329911 17331612 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g1730 1 211 MYB Transcription Factor Family AT5G57620 70.776 1.22e-102 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lal14g1730 Myb_DNA-binding 9.7e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1730 K09422 - gmx:778083 498.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1730 14 17329911 17331612 Lal14g1730 14 17329911 17331612 ECH
Lal14g1730 14 17329911 17331612 Lal7g1133 7 17224118 17226053 LSH
Lal14g1730 14 17329911 17331612 Lal19g1276 19 15894435 15896309 LSH