Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1721 ATGAATTTCCATCATCCTAATACTTCTCTTCACCTAAGGCAATCAGATGAGAACAATTCACTCAATCTTGATCTTCTCCTTGACCCTTCTTCCTCTTCTTCATCTTCACCTCCTGTTACTTCAATGGAACCTAGGATATTCTCATGCAACTATTGTCAGAGAAAGTTTTATAGTTCACAAGCTTTGGGAGGACACCAAAATGCTCATAAGCTGGAGAGGACTCTGGCCAAGAAGAGTAGGGAGCTGAGTTCAGCCATGCAAGCTTATGGAGAAGGAGGACAAGAAAGAAGACCAAATTTCAGTGCTAATTCACACCAACAACACCATCTTGGTCGTGCTCTTGGGGTAATGAAAAACCAAGGACAAGGTACGAGGTTTGTTGGGGAAATAAGAGAGTTTAACTACGGTTCTAAAGAAGGGGTACCTTCTTGGTCACGTGGCTATACTTCTGAAAATGTTCAAGAAGATTCTGAAAGTTCATCACATGGTCTTGTTGGTTCACGTCCCTGGTTGGAAAGACGCATATATAAGTTTTTTGTTGTTGAAAAGGGTGCATATGTGTGCAGCAATTAA 573 0.4136 MNFHHPNTSLHLRQSDENNSLNLDLLLDPSSSSSSSPPVTSMEPRIFSCNYCQRKFYSSQALGGHQNAHKLERTLAKKSRELSSAMQAYGEGGQERRPNFSANSHQQHHLGRALGVMKNQGQGTRFVGEIREFNYGSKEGVPSWSRGYTSENVQEDSESSSHGLVGSRPWLERRIYKFFVVEKGAYVCSN 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1721 190 MobiDBLite consensus disorder prediction 82 108 - -
Lal14g1721 190 Gene3D Classic Zinc Finger 29 104 - -
Lal14g1721 190 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 11 116 IPR044246 GO:0009788
Lal14g1721 190 SUPERFAMILY beta-beta-alpha zinc fingers 44 74 IPR036236 -
Lal14g1721 190 ProSiteProfiles Zinc finger C2H2 type domain profile. 47 74 IPR013087 -
Lal14g1721 190 Coils Coil 68 88 - -
Lal14g1721 190 MobiDBLite consensus disorder prediction 144 164 - -
Lal14g1721 190 PANTHER ZINC FINGER PROTEIN 1-LIKE 11 116 - -
Lal14g1721 190 MobiDBLite consensus disorder prediction 22 41 - -
Lal14g1721 190 ProSitePatterns Zinc finger C2H2 type domain signature. 49 69 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1721 Lal-Chr14 17276365 17277648 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g1721 4 82 C2H2 Transcription Factor Family AT5G57520 69.412 1.82e-26 97.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lal14g1721 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1721 - - gmx:100778014 191.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1721 14 17276365 17277648 Lal14g1721 14 17276365 17277648 ECH
Lal14g1721 14 17276365 17277648 Lal7g1129 7 17197192 17197677 LSH