LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lal14g1720	ATGGCACCTGCAACTCCTCCTTCTCAAGAATTCATCTTCCGTTCCAAACTACCCGATATTCCCATTCCCACCCATCTTCCTCTACACTCTTACTGCTTCCAAAACCTCTCCCAATTCGAACACCGTCCATGCCTTGTCAATGCCGACACCGGCGACACCCTCACCTACGCCGAAGTCGACCTCGCCTCCCGCAGAATCGCCACCGGCCTCGACAAAATCGGAATCCATCAGGGTGACGTCATCATGCTCATCCTTCGCAACTGTCCCCAGTTCGCCCTCTCCTTTTTGGGCGCCTCACACCGTGGCTGCGCCGTCACCACCGCTAACCCCTCTTACACGCCGGCTGAGCTGGCTAAACAAGCGGAGGCCACGAAAGCAAAACTGATCATAACACACGCTGCTTACGTGGACAAAATAAAAACTTACTGTGAAAGCAACGATGTCAAGGTAATATGCATTGATTCATCACAAGAGGAAGGTGTTTTAAACTTCACGGTGTTAACTAACGCTGACGAGAGAGAAATCCCAGACGTTAAAATTAGCCCAGACGACGTCGTTGCAATCCCTTTCTCTTCAGGAACGAGTGGTTTACCTAAGGGAGTAATGTTAACACATAAAAATTTAGTAACCACGGTGGCGCAGCTTGTTGATGGTGAGAACCCACACCAATACAGTGACAGCGACGACGTGCTTCTCTGTGTGCTTCCAATGTTTCATATCTACGCGCTTAACTCGATTTTGCTGTGTGGTATACGTTCTGGAGCAACGGTTTTGATCGTGCCGAAATATGAGACGAGTACATTGCTGGAGTATATAGAGAAGTACAAGGTGACGGTGGCGTCGTTGGTGCCGCCAATTATTTTGGCATTAGTTAAGAATGGGGATGCAGTGAGATACGACTTGTCGTGTGTTCGGGCAGTGATAACAGGTGCAGCACCAATGGGAATGGAGATTGGAGAAGCTCTGAAAACTAGGCTTCCAAATGCCATACTTGGACAGGGATATGGGATGACAGAGGCTGGGCCACTTTGCATAAGCTTAGCATTTGCAAAGGAGCCATTCAAGACAAAGTTAGGTGCATGCGGAAGCGTTGTACGAAATGCTGAGATAAAAATCGTGGACGTAGATATGGGTGCTTCACTTCCCACAAACAAAACTGGTGAAATTTGCGTTAGAGGCACAAAAGTTATGAAAGGATATCTAAATGACCCAGAGGCCACAAAGAGAACTATAGACAAAGAAGGATGGCTCCACACAGGTGATATTGGTTATTTTGACGAAGATGATGAGCTTTTCATCGTTGATCGATTAAAGGAACTAATCAAATACAATGGATTTCAAGTAGCTCCTGCTGAACTTGAAGCAATGTTGATTGCTCACCCAAATATTTCTGATGCTGCTGTTGTACCCTTGAAACATGAAGTTGCTGGAGAAGTTCCAGTTGCATTTGTCGTGAGATCAAATGGTTCTAAGATCACTGAAGATGAAATCAAACATTACATTTCACAACAGGTGGTATCTTACAAGAGAATCAATAGAGTTATCTTCACAGACACTATTCCTAAAGCAGCCTCAGGCAAAATTCTGCGTAAGGAATTAAGTGCAAGGCTTAACGAAGGTTTAGTACAGACCAATTAG	1638	0.4567	MAPATPPSQEFIFRSKLPDIPIPTHLPLHSYCFQNLSQFEHRPCLVNADTGDTLTYAEVDLASRRIATGLDKIGIHQGDVIMLILRNCPQFALSFLGASHRGCAVTTANPSYTPAELAKQAEATKAKLIITHAAYVDKIKTYCESNDVKVICIDSSQEEGVLNFTVLTNADEREIPDVKISPDDVVAIPFSSGTSGLPKGVMLTHKNLVTTVAQLVDGENPHQYSDSDDVLLCVLPMFHIYALNSILLCGIRSGATVLIVPKYETSTLLEYIEKYKVTVASLVPPIILALVKNGDAVRYDLSCVRAVITGAAPMGMEIGEALKTRLPNAILGQGYGMTEAGPLCISLAFAKEPFKTKLGACGSVVRNAEIKIVDVDMGASLPTNKTGEICVRGTKVMKGYLNDPEATKRTIDKEGWLHTGDIGYFDEDDELFIVDRLKELIKYNGFQVAPAELEAMLIAHPNISDAAVVPLKHEVAGEVPVAFVVRSNGSKITEDEIKHYISQQVVSYKRINRVIFTDTIPKAASGKILRKELSARLNEGLVQTN	545

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Lal14g1720	545	SUPERFAMILY	Acetyl-CoA synthetase-like	13	539	-	-
Lal14g1720	545	CDD	4CL	22	533	-	-
Lal14g1720	545	Gene3D	-	438	541	IPR045851	-
Lal14g1720	545	ProSitePatterns	Putative AMP-binding domain signature.	188	199	IPR020845	-
Lal14g1720	545	Gene3D	-	5	437	IPR042099	-
Lal14g1720	545	PANTHER	LONG-CHAIN-FATTY-ACID--COA LIGASE	7	537	-	-
Lal14g1720	545	PANTHER	4-COUMARATE:COA LIGASE-LIKE PROTEIN	7	537	-	-
Lal14g1720	545	Pfam	AMP-binding enzyme C-terminal domain	452	527	IPR025110	-
Lal14g1720	545	Pfam	AMP-binding enzyme	35	443	IPR000873	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Lal14g1720	Lal-Chr14	17263752	17269674	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lal14g1720	8	507	Monolignol Biosynthesis Gene Families	AT1G51680	62.795	0.0	639

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lal14g1720	K01904		-	gmx:100810418	841.262

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Event-related genes

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Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
Lal14g1720	14	17263752	17269674	Lal14g1720	14	17263752	17269674	ECH
Lal14g1720	14	17263752	17269674	Lal7g1128	7	17189396	17192776	LSH
Lal14g1720	14	17263752	17269674	Lal19g1269	19	15856429	15862967	LSH

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