Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1712 ATGAACAGTTTTGACCCTCAAAGACAAGACTCAATGAAAAGGAGATGGCAACAGCATATTATGGAGGTAGCTTCAAATTCTTCTTCTTTGGCTTTCTATGGTGATAATAACAATAATAACTGTAGAAACAAATTCCAAGGCTTTCTTGGGGACGATGATCTAGTGTCCACAGTAGTCCCAGCAGTGACAGTGGTTCTTGAAGGCCGTTCGATCTGTCAGCGCATCAACCTCCATAACCATGCGAGCTACCAAAGTCTCGCCAAGGCACTTAGACAAATGTTTGTGGAGGGTGATGAAGGAAACATGGAGAATGATGATCATCTTGATCTATCTAATGCAATTCCTGGTTACCTTATTGCTTATGAAGACATGGAGAACGATCTTCTTCTTGCAGGCGATCTCAGTTGGAAGGATTTTGTACGTGTGGCAAAGAGAATTCGGATACTTCCAGTGAAGGGGAACTCAAGGAAAGCTGCAACAAGTACAAGAGAAGAAGCATAA 501 0.4232 MNSFDPQRQDSMKRRWQQHIMEVASNSSSLAFYGDNNNNNCRNKFQGFLGDDDLVSTVVPAVTVVLEGRSICQRINLHNHASYQSLAKALRQMFVEGDEGNMENDDHLDLSNAIPGYLIAYEDMENDLLLAGDLSWKDFVRVAKRIRILPVKGNSRKAATSTREEA 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1712 166 PANTHER AUXIN-RESPONSIVE PROTEIN IAA33 1 158 - -
Lal14g1712 166 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 1 158 IPR003311 GO:0005634|GO:0006355
Lal14g1712 166 SUPERFAMILY CAD & PB1 domains 72 148 - -
Lal14g1712 166 Pfam AUX/IAA family 56 149 IPR033389 -
Lal14g1712 166 Gene3D - 56 162 - -
Lal14g1712 166 ProSiteProfiles PB1 domain profile. 59 153 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1712 Lal-Chr14 17237163 17238931 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g1712 63 149 B3 DNA Binding Superfamily AT1G19220 33.333 1.98e-07 47.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX or IAA Lal14g1712 AUX_IAA 5.4e-16 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1712 - - qsu:112025340 200.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1712 14 17237163 17238931 Lal7g1119 7 17133164 17134710 LSH