Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1707 ATGAAAGAAATTGGAAAGCAGAGTAGAAATTTATCGTTGTTTCTAAGAAAGGGAAAATGGGAGTTACATTTGTGCAATTTCAAATTTATCATCTCAGCCTCTGGCTTTGGGTTTGCAGAAGAAGGAAGTATGTATTCGACGAGCCAGTTCGATGGAAACGCAGCCTTCTCCGGCGGTGGTTTCATGCCCTCTCAGGCTACTCAGTCCACTGACTCTTCCTCCTTTCCCTCCAGAAATCGTGATGCACAGTCCCTGCTTCCTCTAACAGTCAAGCAGATAAACGATGCGTTTCTGTCAAGTGATGATAAGACCAATTTGATTATTGATGGTGTTGACGTTAACAATGTCACTCTTGTGGGAAGAGTATGCAACAAAGCTGGAAGGATTACTGATGTTACTTTTGTGCTTGATGATGGCACTGGAAGGATTGAGTGTAATAAATGGCTTCAAGAAGCTGTAGATAGTAATGAAGTGGATGGTATCTTGGATGGAATGTATGTGCGTCTCCATGGACACTTGAAAGGTTTTCAGGGTAAAAGGTCCTTAAATGTTTTCTCGTTCAGGCCTGTGACTGACTTTAATGAGATTGCCAGCCATTTCATTGATTGTGTATATGTCCATCTCTATAATTCCAAAATACGGCTTCAAGCTGGTGTCCCAAATCAGCAACATGTTACCAATTCCACACCTATTACTCCCACAAAAGGTTATCAAGCTTATGCCGTCCCACCAAATCCAGTAAGGGAGAAAATCATGTTTTCTGGTCAACCTAAAAATGCTCCGAAGAGCGTTGAAGATATGGTCTTAGATATTTTGCATCTTCCAACAAACAGGTCAAGGGATGAGGGAGTCCCTCGTGATCTTATTGCACAGCATCTTGGAATTCCTATGGATAAGCTCATGTTGGCTATTAAAAATCTTATCGAGGAAGGCAACATTTATGAAGCTATAGCTGATCACTATAAGTCTATCATCAATGGTTGA 984 0.4126 MKEIGKQSRNLSLFLRKGKWELHLCNFKFIISASGFGFAEEGSMYSTSQFDGNAAFSGGGFMPSQATQSTDSSSFPSRNRDAQSLLPLTVKQINDAFLSSDDKTNLIIDGVDVNNVTLVGRVCNKAGRITDVTFVLDDGTGRIECNKWLQEAVDSNEVDGILDGMYVRLHGHLKGFQGKRSLNVFSFRPVTDFNEIASHFIDCVYVHLYNSKIRLQAGVPNQQHVTNSTPITPTKGYQAYAVPPNPVREKIMFSGQPKNAPKSVEDMVLDILHLPTNRSRDEGVPRDLIAQHLGIPMDKLMLAIKNLIEEGNIYEAIADHYKSIING 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1707 327 Pfam Replication protein A C terminal 228 319 IPR014892 -
Lal14g1707 327 SUPERFAMILY Nucleic acid-binding proteins 85 211 IPR012340 -
Lal14g1707 327 SUPERFAMILY "Winged helix" DNA-binding domain 262 323 IPR036390 -
Lal14g1707 327 Pfam OB-fold nucleic acid binding domain 116 188 IPR004365 GO:0003676
Lal14g1707 327 Gene3D - 259 325 IPR036388 -
Lal14g1707 327 PANTHER REPLICATION PROTEIN A 32 KDA SUBUNIT A 44 323 - -
Lal14g1707 327 Gene3D - 77 212 IPR012340 -
Lal14g1707 327 CDD RPA2_DBD_D 115 208 - -
Lal14g1707 327 PANTHER REPLICATION PROTEIN A-RELATED 44 323 IPR040260 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1707 Lal-Chr14 17205434 17209710 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g1707 44 324 Core DNA Replication Machinery Family AT2G24490 44.912 2.11e-78 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1707 K10739 - gmx:100782819 409.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1707 14 17205434 17209710 Lal14g1707 14 17205434 17209710 ECH