Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1704 ATGAAGTATATTCGGACTACTAGCTTGAAGAGGCTCTTCTCTTTGAAAAGATGGGGTTTGTGGGAACAAATTCTGAGACCCAATGATGAAGTGAACAATGAGAGCTTGAAGATTGTTCCAAGTGAAGAACGAGAAGAAAAACATTCTCAAAGGCCTACATGGAAATGCTTCTCTTATGAAGAATTGTTTGATGCCACCAATGGCTTCAGTGCAGCAAATTTGGTTGGTAAAGGAGGGTATGCAGAGGTTTACAAGGGAACACTGAAAGATGGTGAAAAAATTGCAGTGAAAAGGCTCACAAAAACTTCAAGGGATGAGAGGAAGGAGAAAGAGTTTTTGACAGAGATTGGTACAATTGGTCATGTTCGACATCCTAACGTGTTGTCTCTAATGGGGTGTTGTATTGATAATGGCCTTTACCTTGTTTTTGAGCTATCCTCTACAGGCTCTATTGCATCTCTTCTTCATGATGAAAAATTGCCTCCAGTGGATTGGGAAACAAGGCATAAGATAGCTCTTGGAACTGCACGTGGCCTTCACTACTTGCACAAAGGATGTAAGAGGAGGATAATCCATAGGGACATTAAGGCTTCAAATATTCTGTTGACACTAGATTTTGAACCACGGATATCTGATTTTGGACTAGCAAAATGGCTTCCATCACAATGGACTCATCATTCAATTGCTCCAATAGAAGGGACATTTGGACATTTGGCACCTGAGTACTATTTGCATGGAGTTGTGGATGAGAAAACAGATGTATTTGCCTTTGGTGTTTTCATGTTAGAAGTTATCTCTGGAAGAAAACCAGTGGATAGTTCTCACCAAAGCTTACATAGCTGGGCTAAGCCAATATTGAACAAAGGAGAGATAGAAAAGCTGGTAGATCCAAGACTTGAAGGGACCTATGATGTAATACAGTTAAAAAGACTTGCCTTTGCAGCTTCTCTTTGCATCAGAGCATCTTCAACATGGAGACCTATCATGAGTGAGGTATTAGAGGTAATGGAGGGGGAAGAAATAAATAAGGAGAGGTGGAAAATGCCAGAGGAAGAAGAAGAGCAAGAAGAGGAGTTCTGGGGTTTTGAGGATCTGGAATATGAATATGATAGTTCTTTTTCAATGTCTCTACCAGACTCCATTGGAAGTACTTAG 1155 0.4043 MKYIRTTSLKRLFSLKRWGLWEQILRPNDEVNNESLKIVPSEEREEKHSQRPTWKCFSYEELFDATNGFSAANLVGKGGYAEVYKGTLKDGEKIAVKRLTKTSRDERKEKEFLTEIGTIGHVRHPNVLSLMGCCIDNGLYLVFELSSTGSIASLLHDEKLPPVDWETRHKIALGTARGLHYLHKGCKRRIIHRDIKASNILLTLDFEPRISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYYLHGVVDEKTDVFAFGVFMLEVISGRKPVDSSHQSLHSWAKPILNKGEIEKLVDPRLEGTYDVIQLKRLAFAASLCIRASSTWRPIMSEVLEVMEGEEINKERWKMPEEEEEQEEEFWGFEDLEYEYDSSFSMSLPDSIGST 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1704 384 ProSitePatterns Protein kinases ATP-binding region signature. 75 97 IPR017441 GO:0005524
Lal14g1704 384 PANTHER OS08G0249100 PROTEIN 41 366 - -
Lal14g1704 384 CDD STKc_IRAK 75 338 - -
Lal14g1704 384 ProSiteProfiles Protein kinase domain profile. 69 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal14g1704 384 SMART serkin_6 69 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal14g1704 384 PANTHER OS04G0654600 PROTEIN 41 366 - -
Lal14g1704 384 Gene3D Transferase(Phosphotransferase) domain 1 147 361 - -
Lal14g1704 384 ProSitePatterns Serine/Threonine protein kinases active-site signature. 190 202 IPR008271 GO:0004672|GO:0006468
Lal14g1704 384 Pfam Protein kinase domain 72 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal14g1704 384 SUPERFAMILY Protein kinase-like (PK-like) 48 336 IPR011009 -
Lal14g1704 384 Gene3D Phosphorylase Kinase; domain 1 38 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1704 Lal-Chr14 17186149 17190616 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g1704 39 359 Receptor kinase-like Gene Family AT4G33430 43.030 6.59e-75 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Lal14g1704 Pkinase 2.6e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1704 - - gmx:100819499 635.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1704 14 17186149 17190616 Lal14g1704 14 17186149 17190616 ECH
Lal14g1704 14 17186149 17190616 Lal7g1111 7 17078292 17081626 LSH