Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1701 ATGGCTACCAGCCTTGAGGAAATCAAGAACGAGGGTGTTGATCTGGAACGTATTCCTATTGATGAGGTGTTCGAGCAATTGAAATGCACCAAAGAAGGTTTGTCCTCGGCGGAAGGAGCCAATCGGTTTGTAATATTTGGACCAAACAAGCTTGAAGAGAAAAAGGAAAGCAAATTTCTAAAGTTTCTTGGGTTCATGTGGAATCCTTTGTCATGGGTCATGGAAGCTGCAGCAATTATGGCAATTGCTCTTGCAAATGGTGATGGGAAGCCCCCAGATTGGCAAGACTTTGTTGGTATAGTTTGCTTGTTGGTGATCAACTCTACCATCAGTTTCATTGAAGAAAATAATGCTGGAAATGCTGCTGCTGCTCTTATGGCTGGTCTTGCTCCCAAGACAAAGATCATTACCTTATGTAAACTCAGGGAAGATGTTGCAACGAAGGCTCATGTTATCATTGATAAGTTTGCAGAGAGAGGGTTGCGTTCATTGGCCGTTGCTAGACAGGAAGTTCATGAGAAAACAAAAGAAAGTGTTGGTGGTCCATGGCAATTTGTTGGTTTGTTGCCATTGTTTGACCCCCCGAGGCATGATAGTGCTGAAACTATTCGCAAAGCTCTTAATCTTGGTGTAAATGTCAAGATGATTACTGGTGATCAACTTGCCATAGCCAAGGAGACTGGCCGAAGACTTGGGATGGGAACAAATATGTATCCATCTTCTTCCTTGCTTGGTCAAGACAAAGATGCAAGTGTTGCTGCACTTCCAATAGAAGAGTTGATTGAGAAGGCAGATGGATTTGCTGGAGTCTTTCCAGAGCACAAATATGAAATTGTAAAGAAGTTGCAAGAGAGGAAACACATTTGTGGAATGACCGGAGATGGTGTCAATGATGCTCCGGCTTTGAAGAAGGCTGATATTGGAATTGCTGTTGCTGATGCCACCGATGCTGCAAGAGGTGCTTCTGATATCGTCTTGACAGAACCTGGATTGAGTGTTATTATTAGTGCAGTCTTAACTAGCAGGGCAATTTTCCAAAGAATGAAGAACTACACGATCTATGCAGTATCTATAACTATCCGTATAGTGCTTGGCTTCATGCTCATTGCACTGATCTGGAAATTCGACTTCTCTCCTTTTATGGTTTTGATTATTGCCATTCTTAACGATGGAACAATCATGACAATTTCAAAGGATAGGGTGAAGCCATCTCCCTTGCCTGATAGCTGGAAACTGAGAGAAATATTTGCTACTGGGATTGTTCTTGGAAGTTACTTGGCATTGATGTCTGTTATATTTTTTTGGGCAATGAAAGAAAATTCTTTCTTCCCGGACAAATTTAATGTTAGGCACTTGACTCATGAGGAAATGATGTCTGCATTGTATCTACAAGTCAGTATAGTTAGCCAGGCTCTAATATTTGTAACCCGTTCCCGTAGCTGGTCCTTTGTTGAACGCCCAGGATTGCTATTAATGGGTGCTTTCCTTATTGCTCAGCTGGTTGCTACACTTATAGCAGTATATGCTAATTGGGGCTTTGCAAAGGTCAAAGGAATTGGATGGGGTTGGGCAGGAGTCATTTGGCTCTACAGTATAGTCTTTTATTTTCCTCTTGATATAATGAAGTTTGCCATCCGATACATATTGAGTGGCAAAGCTTGGGTAAACATGCTAGAAAACAAGACTGCATTCACCACCAAGAAAGACTATGGTAAAGAAGAGAGGGAAGCACAATGGGCAGTGGCTCAGAGAACCTTGCATGGACTTCAACCACCAGAACCTTCCAATATTTTCATTGAAAAGAGTAGTTATAGAGAACTCAGTGAGATTGCTGAGCAAGCCAAGAGAAGAGCTGAAGTTGCAAGATTTCGTGAGCTTCACACACTTAAGGGACACGTTGAGTCTGTGGTGAAGCTTAAAGGTCTGGTCATTGATACAATCCAGCAGCACTATACTATGTGA 1962 0.421 MATSLEEIKNEGVDLERIPIDEVFEQLKCTKEGLSSAEGANRFVIFGPNKLEEKKESKFLKFLGFMWNPLSWVMEAAAIMAIALANGDGKPPDWQDFVGIVCLLVINSTISFIEENNAGNAAAALMAGLAPKTKIITLCKLREDVATKAHVIIDKFAERGLRSLAVARQEVHEKTKESVGGPWQFVGLLPLFDPPRHDSAETIRKALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSSLLGQDKDASVAALPIEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLREIFATGIVLGSYLALMSVIFFWAMKENSFFPDKFNVRHLTHEEMMSALYLQVSIVSQALIFVTRSRSWSFVERPGLLLMGAFLIAQLVATLIAVYANWGFAKVKGIGWGWAGVIWLYSIVFYFPLDIMKFAIRYILSGKAWVNMLENKTAFTTKKDYGKEEREAQWAVAQRTLHGLQPPEPSNIFIEKSSYRELSEIAEQAKRRAEVARFRELHTLKGHVESVVKLKGLVIDTIQQHYTM 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1701 653 PRINTS H+-transporting ATPase (proton pump) signature 149 167 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lal14g1701 653 PRINTS H+-transporting ATPase (proton pump) signature 264 280 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lal14g1701 653 PRINTS H+-transporting ATPase (proton pump) signature 292 308 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lal14g1701 653 PRINTS H+-transporting ATPase (proton pump) signature 323 348 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lal14g1701 653 PRINTS H+-transporting ATPase (proton pump) signature 462 483 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lal14g1701 653 PANTHER PLASMA MEMBRANE ATPASE 3 136 - -
Lal14g1701 653 PANTHER PLASMA MEMBRANE ATPASE 135 633 - -
Lal14g1701 653 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 136 198 IPR023299 GO:0000166
Lal14g1701 653 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 267 380 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lal14g1701 653 Pfam haloacid dehalogenase-like hydrolase 185 306 - -
Lal14g1701 653 Gene3D - 602 653 - -
Lal14g1701 653 SUPERFAMILY Calcium ATPase, transmembrane domain M 14 549 IPR023298 -
Lal14g1701 653 Gene3D - 65 151 - -
Lal14g1701 653 Gene3D - 292 548 - -
Lal14g1701 653 PANTHER CALCIUM-TRANSPORTING ATPASE 135 633 - -
Lal14g1701 653 PANTHER CALCIUM-TRANSPORTING ATPASE 3 136 - -
Lal14g1701 653 Gene3D - 184 253 IPR023214 -
Lal14g1701 653 SUPERFAMILY HAD-like 184 338 IPR036412 -
Lal14g1701 653 Pfam Cation transporter/ATPase, N-terminus 18 80 IPR004014 -
Lal14g1701 653 PRINTS P-type cation-transporting ATPase superfamily signature 187 198 - -
Lal14g1701 653 PRINTS P-type cation-transporting ATPase superfamily signature 209 219 - -
Lal14g1701 653 PRINTS P-type cation-transporting ATPase superfamily signature 292 311 - -
Lal14g1701 653 PRINTS P-type cation-transporting ATPase superfamily signature 315 327 - -
Lal14g1701 653 SMART Cation_ATPase_N_a_2 14 86 IPR004014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1701 Lal-Chr14 17165262 17173347 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g1701 130 653 Primary Pumps ATPases AT2G24520 81.749 0.0 898
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1701 K01535 - gmx:100816905 931.784