Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1671 ATGATATTTGGTGTTAGTGAAACGACTCCGTTTTCAGAGCCTAGTGCAGCGACAGTGAAACTAGAGCAAGTCACGTTTTTAGACTCTGGTGTCTCATCTTCCTCTGAAGGAGTTTTCAGCGAAAGTAAGAATTCTGAAGTGACTGAAGAAAAAGGTGGTAGTGGTAATCATAATAATATAAAAGAAGAGGTTATTGATGATGTTGGTGTTAATGGTTCTTCTTCTTCTTCATCCTCAATGGAGGAAATGCCAAAACCGATGGAAGGGTTGAATGAGGTGGGACCACCACCGTTTCTGAAGAAAACCTTTGAAATGGTGGAGGATCCTGAAACAGACCCGATTGTGGCGTGGAGCGAAACTCGTGATAGCTTCATCGTTTTCGACTCTCATAACTTCTCTAAACACCTTCTTCCTAAGTACTTCAAGCACAGCAATTTCTCTAGCTTCATCCGCCAGCTCAACACTTATGGGTTTAGGAAGGTTGATTCAGACCGATGGGAGTTTGCAAATGAAGGATTTCAGGGAGGGAAAAAACATTTGCTGAAAAACATTAGGAGAAGGAGTAAGTATAACAAACAGCATCAAGGTGCATTCAATTCAATGAAACCTGGCCTAGAGGCTGAAGTTGAGAAACTGAAGAAGGACCAAAACATAATGAAACTTGAAATCCTGAAGCTGAGACAGCAGCAGGAGAATTCACATATGCAACTCACAAATGCTCAGGAGCAAATTCGTTGTGCAGAAATGAAGCAGTATCAGATGATATTTTTCCTCACCAAAATGTGTAGAAAGCCAATGCTTGTAGATCAGTTAATCCACAAGATTAAGAGAAAAAGAGAGCTTGATGGTAATGACATAGTTAAGAGGCTCAGATTGATGGGAGCACAGTGCCCTATAAACTGCCCTAAGGCCATGGAGACAAATAATACCCTTAATGTTGATTATAGAGACCAAGGTCATGAACAATTCACTACATTGCAATCTGACCTCACTGGACTCCTATCTGAAGGTGTTAACAACAACAGCATGGGTATGGAAGATGAATTATGTAGATCAGTGCAAGGCTTAAGGGGCTATGGTTCTAGAACAAATGGAAATGATGTATCTTCAGCTTATCATGTTGTGTCAGAGAAACTAATGAGGGAAAATTCTGTTATTGATGAAGAACAACTAGAAGATGTGAATGACTCGAATATCTATCTTGAATTAGAGGATTTGATAAGTAAGCCATCTGATTGGGTTGGATTAGCAAGTGGATTAGTGGGACAAACTAGTTGA 1278 0.4014 MIFGVSETTPFSEPSAATVKLEQVTFLDSGVSSSSEGVFSESKNSEVTEEKGGSGNHNNIKEEVIDDVGVNGSSSSSSSMEEMPKPMEGLNEVGPPPFLKKTFEMVEDPETDPIVAWSETRDSFIVFDSHNFSKHLLPKYFKHSNFSSFIRQLNTYGFRKVDSDRWEFANEGFQGGKKHLLKNIRRRSKYNKQHQGAFNSMKPGLEAEVEKLKKDQNIMKLEILKLRQQQENSHMQLTNAQEQIRCAEMKQYQMIFFLTKMCRKPMLVDQLIHKIKRKRELDGNDIVKRLRLMGAQCPINCPKAMETNNTLNVDYRDQGHEQFTTLQSDLTGLLSEGVNNNSMGMEDELCRSVQGLRGYGSRTNGNDVSSAYHVVSEKLMRENSVIDEEQLEDVNDSNIYLELEDLISKPSDWVGLASGLVGQTS 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1671 425 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 76 412 IPR027725 -
Lal14g1671 425 SMART hsfneu3 94 187 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lal14g1671 425 Pfam HSF-type DNA-binding 98 187 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lal14g1671 425 PRINTS Heat shock factor (HSF) domain signature 98 121 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lal14g1671 425 PRINTS Heat shock factor (HSF) domain signature 136 148 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lal14g1671 425 PRINTS Heat shock factor (HSF) domain signature 149 161 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lal14g1671 425 MobiDBLite consensus disorder prediction 43 64 - -
Lal14g1671 425 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-9 76 412 - -
Lal14g1671 425 MobiDBLite consensus disorder prediction 31 94 - -
Lal14g1671 425 Gene3D - 91 188 IPR036388 -
Lal14g1671 425 SUPERFAMILY "Winged helix" DNA-binding domain 94 187 IPR036390 -
Lal14g1671 425 Coils Coil 209 229 - -
Lal14g1671 425 ProSitePatterns HSF-type DNA-binding domain signature. 137 161 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1671 Lal-Chr14 16934915 16937195 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g1671 84 401 HSF AT2G26150 42.378 1.80e-79 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Lal14g1671 HSF_DNA-bind 1.7e-31 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1671 K09419 - gmx:100818430 536.184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1671 14 16934915 16937195 Lal14g1671 14 16934915 16937195 ECH