Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1661 ATGCTTACATGCATAACTCGTCCCAAGAAACCAGAGAGCGACTCAGTGAGTAAGCCTGACGATTCCGATGGAAACGCCGCTAAAACCCAAGCCGTCAAATCCCTCACGTCTCAGATAAAGGATATGGCGTTGAAAGCATCGGGGGCGTACAAGCACTGCGCTCCTTGTACAGGGCCACCGTCGCAGGGTGGTGGATTAAGGAGTAATACCGAATCGGACGCGGAGTCGGATCGATTCCGATTGTCGTACCGGAGAACTGGGAGCTCGAGTTCAACGAGGACGTGGGGGAAGGAAATGGAAGCGCGGCTGAAGGGGATATCGAGCGGGGAAGGGACGCCGAACTCCGCCAGTGGACGGCGAGGGGAGCCGGTGGTTTTGTTCGTGGAAGAGAACGATCCCAAGGAGTGGGTGGCGCAAGTGGAGCCTGGCGTTTTGATCACATTCGTATCGCTCCCACGTGGCGGGAACGATCTGAAGCGTATACGGTTCAGTCGTGAGATGTTCAACAAATGGCAAGCTCAAAAGTGGTGGTCAGAGAACTATGACAAGGTCATGGAACTTTACAATGTTCAAAGGCTTAACCACCATGCTTTCCCTCTTCCAACGCCACCAAGGTCTGAAGATGAGAGCTCAAAGCTTGAATCAGCAGAAGCCAGCCCTGTAACACCTCCGCTAACAAAGGAACGAATCCCTCGTACTTTGTACCGTCCAACAGGGATGGGAATGGGATATTCATCCTCAGATTCTTTTGATTATCAGTCAATGCACTCCCGGAATTTCATGGACTGGACAACTGGCATGAGCTCAACCCCAAAAGTCTCCACTATTAGTACGGCCAAAACAGAGTTATCATCAATGGATGCTTCTATCATAAGTAGCTCATCCAGAGATGCTGATCGCTCATGTGATCTATCAATCAGCAATGCTAGTGATTTGGATAGTGAATGGGTAGAACAGGATGAACCTGGGGTTTACATTACCATCAGAGCATTGCCAGGCGGCAAAAGGGAGCTCAAACGAGTCAGGTTCAGGTACACTTGCAGCTCATTGCTAGGTGGATGA 1062 0.5075 MLTCITRPKKPESDSVSKPDDSDGNAAKTQAVKSLTSQIKDMALKASGAYKHCAPCTGPPSQGGGLRSNTESDAESDRFRLSYRRTGSSSSTRTWGKEMEARLKGISSGEGTPNSASGRRGEPVVLFVEENDPKEWVAQVEPGVLITFVSLPRGGNDLKRIRFSREMFNKWQAQKWWSENYDKVMELYNVQRLNHHAFPLPTPPRSEDESSKLESAEASPVTPPLTKERIPRTLYRPTGMGMGYSSSDSFDYQSMHSRNFMDWTTGMSSTPKVSTISTAKTELSSMDASIISSSSRDADRSCDLSISNASDLDSEWVEQDEPGVYITIRALPGGKRELKRVRFRYTCSSLLGG 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1661 353 Pfam Transcription factor BRX N-terminal domain 25 56 IPR027988 -
Lal14g1661 353 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 344 IPR044532 -
Lal14g1661 353 Pfam Transcription factor regulating root and shoot growth via Pin3 314 344 IPR013591 -
Lal14g1661 353 Pfam Transcription factor regulating root and shoot growth via Pin3 134 188 IPR013591 -
Lal14g1661 353 ProSiteProfiles BRX domain profile. 314 353 IPR013591 -
Lal14g1661 353 ProSiteProfiles BRX domain profile. 134 189 IPR013591 -
Lal14g1661 353 MobiDBLite consensus disorder prediction 1 33 - -
Lal14g1661 353 MobiDBLite consensus disorder prediction 50 80 - -
Lal14g1661 353 MobiDBLite consensus disorder prediction 200 228 - -
Lal14g1661 353 PANTHER PROTEIN BREVIS RADIX-LIKE 4 1 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1661 Lal-Chr14 16862528 16868061 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g1661 1 343 Major Intrinsic Protein MIP AT1G31880 42.265 5.21e-73 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1661 - - gmx:100794109 538.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1661 14 16862528 16868061 Lal14g1661 14 16862528 16868061 ECH
Lal14g1661 14 16862528 16868061 Lal19g1200 19 15419632 15423684 LSH
Lal14g1661 14 16862528 16868061 Lal4g1530 4 19408366 19421813 PCT
Lal4g1530 4 19408366 19421813 Lal14g1661 14 16862528 16868061 PCT