Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1651 ATGGCAGTTCCAACATCAATTTACAATTTCATGAACCAATCTTCCTCTGATTCCAAACAAGGAAAACCACTCAACCCAAAATCCTCTTCATCTTTTTCTTCCATTCGCACATTTCAATGCAATTTCTGCCACCGCAAGTTTTATACTTCTCAAGCTCTCGGTGGCCATCAAAATGCTCATAAGCTTGAACGAGCGGCTATTAGGAGAACCAACAATGTTTCTACATTACCATCATTGGATTTGAACACTTGTTCTTTTGAACCTCCTCATGATCATTTCTTTGGTGGTCATGCATCTTATTGGCTTCAAATGGAACAACCATTTCAGTTTCAGACCCATCACCAAGAAGTTGCAGCAGTAAATAATACTAATGTTCCTATTTCTAATTACCATGCTGATGCTTCTACTTCTTCCACTTCCACCAACAATGCTTCTGCTTCTGATGCTTCTGATCATGTCAACCTCGACCTCACTCTTCGCCTCTGA 486 0.4012 MAVPTSIYNFMNQSSSDSKQGKPLNPKSSSSFSSIRTFQCNFCHRKFYTSQALGGHQNAHKLERAAIRRTNNVSTLPSLDLNTCSFEPPHDHFFGGHASYWLQMEQPFQFQTHHQEVAAVNNTNVPISNYHADASTSSTSTNNASASDASDHVNLDLTLRL 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1651 161 ProSitePatterns Zinc finger C2H2 type domain signature. 40 60 IPR013087 -
Lal14g1651 161 ProSiteProfiles Zinc finger C2H2 type domain profile. 38 65 IPR013087 -
Lal14g1651 161 PANTHER OS02G0182300 PROTEIN 13 161 - -
Lal14g1651 161 SUPERFAMILY beta-beta-alpha zinc fingers 36 65 IPR036236 -
Lal14g1651 161 Gene3D Classic Zinc Finger 12 82 - -
Lal14g1651 161 MobiDBLite consensus disorder prediction 130 149 - -
Lal14g1651 161 PANTHER ZINC FINGER PROTEIN JAGGED 13 161 IPR045320 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1651 Lal-Chr14 16810705 16811190 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g1651 33 88 C2H2 Transcription Factor Family AT5G14010 58.621 9.16e-15 66.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lal14g1651 None None None