Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1639 ATGGTGAAACCAAACATGGAAAATACGAAGGAACGAAGTTGTCAGTTCAAGGGAATTCGAAAGAGGAAATGGGGGAAATGGGTTTCTGAAATAAGACTACCCAATAGCCGCCAGAGGATTTGGTTAGGTTCCTTTGACTCCGCCGAGAAGGCCGCGCGTGCTTTCGACGCTGCTACCTTCTGCTTACGTGGCCGCAACGCCAGGTTTAATTTCCCTGATGACCCACCCGACATCGCCGGCGGCAACTCCATGACGCCGACTCAAATTCAGGCCGCCGCAGCCAGTTTTGCAAATTCGGGTCGGCCCAATAAATCTGAATCTCACGTGGAATGCTCTACGGTGGAGACAATTTTGTTGCAAACGGAGTCACCTTCCCCTTGTATCTCAGAAGGGAATGTCCAAACGGACAGTGACGTCACCGTTAATTGTTTGTTTCCGGATTTAATGGCACCAATCGGGTCGGGTAATTTTGTAACCGATTATGGGATGTTCCTGGGTTTCGATGATTTTAGTGGTGAGTACTATGTTCCTGAAATGGAGAATGTTAATTATTATGGAGAAGAAAACATGGATGGGTTTATAATTGAGGACTCTTTTTTGTGGAATTTCTAA 612 0.4657 MVKPNMENTKERSCQFKGIRKRKWGKWVSEIRLPNSRQRIWLGSFDSAEKAARAFDAATFCLRGRNARFNFPDDPPDIAGGNSMTPTQIQAAAASFANSGRPNKSESHVECSTVETILLQTESPSPCISEGNVQTDSDVTVNCLFPDLMAPIGSGNFVTDYGMFLGFDDFSGEYYVPEMENVNYYGEENMDGFIIEDSFLWNF 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1639 203 SUPERFAMILY DNA-binding domain 15 73 IPR016177 GO:0003677
Lal14g1639 203 Gene3D AP2/ERF domain 14 73 IPR036955 GO:0003700|GO:0006355
Lal14g1639 203 ProSiteProfiles AP2/ERF domain profile. 15 72 IPR001471 GO:0003700|GO:0006355
Lal14g1639 203 CDD AP2 14 74 IPR001471 GO:0003700|GO:0006355
Lal14g1639 203 SMART rav1_2 15 78 IPR001471 GO:0003700|GO:0006355
Lal14g1639 203 PANTHER TRANSCRIPTION FACTOR AP2-EREBP FAMILY-RELATED 4 203 - -
Lal14g1639 203 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 4 203 - -
Lal14g1639 203 PRINTS Ethylene responsive element binding protein signature 16 27 IPR001471 GO:0003700|GO:0006355
Lal14g1639 203 PRINTS Ethylene responsive element binding protein signature 38 54 IPR001471 GO:0003700|GO:0006355
Lal14g1639 203 Pfam AP2 domain 14 64 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1639 Lal-Chr14 16747800 16748411 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g1639 14 203 AP2-EREBP Transcription Factor Family AT1G19210 45.361 3.64e-54 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lal14g1639 AP2 1.6e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1639 - - gmx:732656 266.929
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1639 14 16747800 16748411 Lal14g1639 14 16747800 16748411 ECH