Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1638 ATGTCGACCTTGTCGGAGATTTCGGATGTTTCCGGTCAGAAACTGCCGGAGAAGTCTACGTTCTCTCAAACTTGTAGTTTGTTGACCCAATACCTCAGAGAGAAGGGTAGCTTCGGTGATCTTAACTTCGGGATGACATGCACCACTCAAATAAATGGGTCACCTGAGACATCTTGTCTCTCTGCAATGGACTTGTTTCCTACCAAAGAAAACAACATCACACCCCCAAACTTGATAACTAGGGATTTGTTCTCTCCACCAACAAAAGAGGTTCCAACTTTGGTCAATCCAAGTGCATTTAAGTCTCTGGGCAAGGAGCCCAAATCTGCACAATTGACAATCTTTTATGGTGGCCAAGTTATTGTATATGATGATTTTCCTGCTAACAAAGTTGAGGAGATAATGTCCCTTGCTAGAAAAGGAATCTCCCAAAATCACAATACCTCTGTATATGGTCATACTTCGACTCAGCCTTCAATGACTCCTAATATAATTCCTCATAACTTGATTCAAGAACACCCTCATCATGCACCAATTGTTGGTGATCTACCAATTGCTAGGAAAGCTTCCCTTCATCGTTTCCTGGAGAAGAGGAAGGATAGAATTACTGCCAAAGCTCCATATCAAACAAGCAATCCCATGGCAGTATCTACTAAGCCAGCTGAATCAATGGCATGGCTTGGGTTGGCTGCTAAATCATCTCTCTGA 708 0.4266 MSTLSEISDVSGQKLPEKSTFSQTCSLLTQYLREKGSFGDLNFGMTCTTQINGSPETSCLSAMDLFPTKENNITPPNLITRDLFSPPTKEVPTLVNPSAFKSLGKEPKSAQLTIFYGGQVIVYDDFPANKVEEIMSLARKGISQNHNTSVYGHTSTQPSMTPNIIPHNLIQEHPHHAPIVGDLPIARKASLHRFLEKRKDRITAKAPYQTSNPMAVSTKPAESMAWLGLAAKSSL 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1638 235 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 14 230 IPR040390 -
Lal14g1638 235 ProSiteProfiles Tify domain profile. 105 140 IPR010399 -
Lal14g1638 235 Pfam tify domain 106 138 IPR010399 -
Lal14g1638 235 PANTHER PROTEIN TIFY 10A 14 230 - -
Lal14g1638 235 Pfam Jas motif 184 209 IPR018467 -
Lal14g1638 235 SMART tify_2 105 140 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1638 Lal-Chr14 16747697 16752164 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g1638 1 232 Tify Gene Family AT1G19180 40.698 1.21e-50 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Lal14g1638 tify 5.7e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1638 K13464 - gmx:100801449 268.855
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1638 14 16747697 16752164 Lal7g1044 7 16583394 16585491 LSH
Lal14g1638 14 16747697 16752164 Lal19g1186 19 15294520 15297914 LSH
Lal14g1638 14 16747697 16752164 Lal17g1483 17 16279601 16282714 PCT
Lal14g1638 14 16747697 16752164 Lal21g1182 21 14630503 14633553 PCT
Lal14g1638 14 16747697 16752164 Lal4g1510 4 19273028 19276359 PCT
Lal17g1483 17 16279601 16282714 Lal14g1638 14 16747697 16752164 PCT
Lal21g1182 21 14630503 14633553 Lal14g1638 14 16747697 16752164 PCT
Lal4g1510 4 19273028 19276359 Lal14g1638 14 16747697 16752164 PCT