Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1637 ATGAAGGCTCCATCAAATGGTTATTTGCCTAATTCAGCTGAAGTGGAATGGAAGACCATCAATTCAGAGTTGTGGCATGCTTGTGCTGGACCTTTGGTTTCTTTGCCTCCTGTTGGGAGTCTTGTGGTTTACTTTCCTCAAGGACACAGTGAACAAGTTGCAGCTTCCATGCAAAAGCAGACTAACTTCACTCCCAGTTACCCTGACCTTCAATCAAAGTTGATTTGCAGACTTCAAAATGTTGCCCTGCATGCTGATCCTGAAACTGACGAGGTTTATGCACAGATGACCCTTCAACCTGTAAACAAATATGACAAGGAAGCAATACTGGCATCAGACATGGGTCTCAGACAAAGCCGACAGCCTACTGAATTCTTTTGCAAAACTCTTACAGCTAGTGACACAAGCACTCATGGTGGATTTTCCGTGCCTCGTAGAGCAGCTGAGAAAATATTCCCTCCTCTGGATTATTCAATGCAACCTCCTGCTCAAGAGCTTGTTGCCAAAGATTTGCATGACACCACATGGGCATTTAGACATATTTATCGCGGACAACCTAAGAGGCATCTATTGACTACTGGATGGAGTGTATTTATCAGCACAAAAAGACTGTTTGCTGGAGATTCTGTTCTTTTTATCAGAGATGAAAGACAGGACCTTCTTTTAGGTTTAAGGCGAGCTAACAGGCAACAGCCAGCACTGTCTTCATCAGTAATATCCAGTGACAGCATGCATATTGGTATTCTTGCTGCTGCAGCAAATGCTGCTGCAAATAACAGCCCTTTTACTTTATTTTACAATCCAAGGGCCAGCGCCTCTGAATTTGTTATTCCATTGGCCCAGTATAACAAAGCCATGTACACTCAAGCTTCACTCGGAATGAGATTTAGAATGATGTTTGAGACCGAGGAATCAGGAGTGCGAAGATACATGGGTACAATCACTGGGATCAGTGACTTGGATCCTGTCCGATGGAAAGGTTCACAGTGGCGCAATCTTCAGGTTGGATGGGATGAATCAACAGCTGGTGAACGCCCAAGCAGAGTTTCGCTTTGGGAAATTGAGCCAGTAGTATCTCCTTTCTACATTTGCCCACCTCAATTTTTAAGGTCCAAGTTTCCCAGGCAACCAGGAATGCCAGATGACGGGCCTGATATAGAAAATGCTTTCAAGAGAGTCATGCCCTGGCTTGGAGAAGACTTTGGCATGAATGATCTCTCAAATTCAGTCTATCCTGGTTTGAGTTTAGTCCAGTGGATGAGCATGCAGCAGAATAATCAATTCTCTGCTGCTCAACCGGGATTTACCCCGGCTAAGCTTTCACCTAATACTATACACAATAACCTTGGAACTGATGACCCATCCAAGTTGTTGAATTTTCAAGCTCCTGCCCTCTCTGCACCAAATCTTCAGCTTAACAAATTCAATTTTCCAAATCAAATCAACAAATCGCAACAGTCCCCAACTTCATGGCCTCAGCAGCAGCAGCAACAACAGCAGCAACAACAGCTGCATCAGCAGCAGCAACAACAACAACAGCAACAACAGCTGCATCAGCAACAACAGCAACAGGAGCTGCTGCAGAAGCCGCAACAGCAACAGGTGCAATCATTGTTGCAAACGCCAGTAAACCAACTCCAGCAGCAGACGCAACAACAGCTTCCTGAACCACAAAACATGCAATTACTCCAGCAACAACAGCCCCAACTGCCTCAGAAATTAGGACAGCAGCGACAGTCATATCAACATGCTATTATGAGTAATGGCACAGTTACTTCTAACCAGAATACAAATCAGTTTGTACCACAACCGGTAGCCTACTCTCAGCTTCAGCAACAGCAATTACTTTCACGAGATATCCCACCCCAGCAAAGTATCCAATCGGCTAGTAATAATACATTCCCACTGCCACCCCTACCACAAGACTCACTATCTCAGCAACAGATAGACCAGCAAGCAAGTCTCTTACAGAGGCAGCAGCAACAGCCACAGCTGCAACAGTCTCCACTTCAGTTACTGCAACAAAACCTGTCACAGAGGGCGATGCAGCAACCACAAATGACTCAAATGTCACTACAAAACCCTTCAGAGAAACAACTACAGCTACAGTTTCTACAGAAATGGCAGCATCAACAGCAACAACAGCATCAACAGCTTCTTTCTACGTCTAGCCCACTTTTGCAATCTCAGCTTCTACAGAAACAAAATACTCACCAATTACCGCAACAAACTCTATCTCAGCATGAGCCTCAACAACTTGGCATTGGTAATATTGCATTACCAACAGAGAAGCCTCTCAACAGCAATGACTTCACTTCTTCAGCTCTTATGCAATCACAGCAGCTGCCTGTCAACCAAATCCAAAATAGACAGAAATCCCTTACAATCACTAGAGCTCCCTCTACTCTCACAGATGGAGATGCCCCATCATGCTCAACCTCGCCGTTTACGAATAATTGCCAGATATCTCCATCAAACCTCCTGAAAAGAAATCATCAAGTGCCAGCTACATTAGGGGGTAGTTTGGTAGTTGATCCCACATGTAATCTGATACAGGAGCTTTACAGTAAGTCCGATATGCAGATTAAACATGAGTTTTCCAGTGTAAAAGGACCTGACCAGACTAAACATAAAGGAAGAATTACTGATCATATGGAAGCTTCTTCTTCTGGAACGTCTCACTGTCTTGATCCTGGTAGTGTCCAGCAAAACCTACCACTTCCCAACTTCTTCATTGATGGGGATATCCAATCACACCCTAGAAACAATCTAACATTTGATTCTAATCTTGATGTACTAACATCTGATACAATGCATTTAAAAGGGTCGGACTCTCAAAGAGATCTTCAAAATTTGTTGGCTAATTATGGTGGTACTCCACGAGACATTGAAACTGAGCTGTCCACTGCTGACATCAGCTCACAGCCGTTTGGAGTGCCAAATGTGTCTTTTAATCCAGCTTGCTCAAGTGATGTTGGCATAAATGATATCGGGGTTTTGAATAACAGTGTGTGGGCTAGCCAGACTCAACGAGTGCGAACATATACCAAGGTGCAAAAGCGTGGCTCTGTTGGAAGATGTATTGATGTCACACGTTACAAGGGATATGATGAACTGCGGTATGATTTGGCTCGTATGTTTGGGATTGAAGGGAAGCTAGAAGATCCTCAAAGGACTGAGTGGAAACTAGTATATGTGGATCATGAAAGTGACATTCTTCTTCTTGGTGATGATCCTTGGGAAGAATTTGTAAGCTGTGTCCAGAGCATAAAGATACTGTCATCTGTTGAGGTGCAGCAAATGAGCTTAGATGGGGATTTAGATAAGGATTTCATCAGAGACAAGTTGGAGGACCAACTTAACTTTTTAAAACTTCTGGATGGTGCTTCTACTCTTCTATATCACAAATGGAAAGGAGACATATTCATTGCAAATGATGCAGTTGAAGAGCGTATTGTAGAGGGCAAGTGA 3471 0.4368 MKAPSNGYLPNSAEVEWKTINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKQTNFTPSYPDLQSKLICRLQNVALHADPETDEVYAQMTLQPVNKYDKEAILASDMGLRQSRQPTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDYSMQPPAQELVAKDLHDTTWAFRHIYRGQPKRHLLTTGWSVFISTKRLFAGDSVLFIRDERQDLLLGLRRANRQQPALSSSVISSDSMHIGILAAAANAAANNSPFTLFYNPRASASEFVIPLAQYNKAMYTQASLGMRFRMMFETEESGVRRYMGTITGISDLDPVRWKGSQWRNLQVGWDESTAGERPSRVSLWEIEPVVSPFYICPPQFLRSKFPRQPGMPDDGPDIENAFKRVMPWLGEDFGMNDLSNSVYPGLSLVQWMSMQQNNQFSAAQPGFTPAKLSPNTIHNNLGTDDPSKLLNFQAPALSAPNLQLNKFNFPNQINKSQQSPTSWPQQQQQQQQQQQLHQQQQQQQQQQQLHQQQQQQELLQKPQQQQVQSLLQTPVNQLQQQTQQQLPEPQNMQLLQQQQPQLPQKLGQQRQSYQHAIMSNGTVTSNQNTNQFVPQPVAYSQLQQQQLLSRDIPPQQSIQSASNNTFPLPPLPQDSLSQQQIDQQASLLQRQQQQPQLQQSPLQLLQQNLSQRAMQQPQMTQMSLQNPSEKQLQLQFLQKWQHQQQQQHQQLLSTSSPLLQSQLLQKQNTHQLPQQTLSQHEPQQLGIGNIALPTEKPLNSNDFTSSALMQSQQLPVNQIQNRQKSLTITRAPSTLTDGDAPSCSTSPFTNNCQISPSNLLKRNHQVPATLGGSLVVDPTCNLIQELYSKSDMQIKHEFSSVKGPDQTKHKGRITDHMEASSSGTSHCLDPGSVQQNLPLPNFFIDGDIQSHPRNNLTFDSNLDVLTSDTMHLKGSDSQRDLQNLLANYGGTPRDIETELSTADISSQPFGVPNVSFNPACSSDVGINDIGVLNNSVWASQTQRVRTYTKVQKRGSVGRCIDVTRYKGYDELRYDLARMFGIEGKLEDPQRTEWKLVYVDHESDILLLGDDPWEEFVSCVQSIKILSSVEVQQMSLDGDLDKDFIRDKLEDQLNFLKLLDGASTLLYHKWKGDIFIANDAVEERIVEGK 1156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1637 1156 Gene3D - 289 361 - -
Lal14g1637 1156 Gene3D - 124 227 IPR015300 -
Lal14g1637 1156 Gene3D - 1008 1102 - -
Lal14g1637 1156 CDD B3_DNA 125 217 IPR003340 GO:0003677
Lal14g1637 1156 SMART B3_2 126 228 IPR003340 GO:0003677
Lal14g1637 1156 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 1 1120 IPR044835 GO:0003677|GO:0006355|GO:0009725
Lal14g1637 1156 Pfam AUX/IAA family 1010 1099 IPR033389 -
Lal14g1637 1156 ProSiteProfiles PB1 domain profile. 1013 1106 IPR000270 GO:0005515
Lal14g1637 1156 PANTHER AUXIN RESPONSE FACTOR 19 1 1120 - -
Lal14g1637 1156 SUPERFAMILY CAD & PB1 domains 1026 1091 - -
Lal14g1637 1156 Coils Coil 494 524 - -
Lal14g1637 1156 MobiDBLite consensus disorder prediction 479 502 - -
Lal14g1637 1156 SUPERFAMILY DNA-binding pseudobarrel domain 116 253 IPR015300 -
Lal14g1637 1156 MobiDBLite consensus disorder prediction 431 452 - -
Lal14g1637 1156 ProSiteProfiles B3 DNA-binding domain profile. 126 228 IPR003340 GO:0003677
Lal14g1637 1156 Pfam Auxin response factor 252 334 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Lal14g1637 1156 Pfam B3 DNA binding domain 126 227 IPR003340 GO:0003677
Lal14g1637 1156 MobiDBLite consensus disorder prediction 612 661 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1637 Lal-Chr14 16738705 16746000 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g1637 1 490 B3 DNA Binding Superfamily AT5G20730 75.551 0.0 751
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Lal14g1637 AUX_IAA 3.3e-08 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1637 - K14486 gmx:100805456 860.522
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1637 14 16738705 16746000 Lal14g1637 14 16738705 16746000 ECH
Lal14g1637 14 16738705 16746000 Lal7g1042 7 16564862 16572735 LSH
Lal14g1637 14 16738705 16746000 Lal17g1480 17 16233046 16246817 PCT
Lal14g1637 14 16738705 16746000 Lal4g1505 4 19217790 19228077 PCT
Lal17g1480 17 16233046 16246817 Lal14g1637 14 16738705 16746000 PCT
Lal4g1505 4 19217790 19228077 Lal14g1637 14 16738705 16746000 PCT