Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1629 ATGGGAAGAGAAATAGAAGAGGAGCAAGTAGGTTACACAGTGGAACAGCTTGTTTCCCTTAATCGCTATAATCCTGATATTCTTCCTGATCTCGAAAACCATGTCAACGACCAGGTTTCATCACAAACATACAGTTTGGATGCAAATCTCTGTCTCCTTCGCCTCTACCAGTTTGAACCTGATAAAATGAGTTCTCAGATTGTTGCCCGCATATTGGTTAAGGCTCTCATGGCAATGCCTGCTCCGGACTTCAGTCTGTGTCTCTTTTTGATTCCAGAACGCGTGCAAATGGAGGAGCAGTTCAAGACACTGATTGTTCTGTCTCACTATCTGGAGACCGGAAGGTTTCGCCAGTTCTGGGACGAAGCAGCAAAAAATCGTCACATTGTTGAAGCAGTGCCCGGATTTGAGCAGGCAATTCAAAGCAATGCGATTCATGTCCTTTCCTTGACTTATCAAAAGGTTCCTAGAGCTGTGCTTGCTGAGGCTATAAACATAGAAGGTTTATCCTTGGACAAATTCCTCGAACACCAAGTAGCCACCTCTGGCTGGGCAATTGAGAAAAGCAGCCAAGGAAAGGGTCAACTTATTGTCCTTCCTAGAAATGAATTTAATGACCCAATTTCGAAGAAAAACACTGCAGATAGTGTACCATTGGAGCATATTACTCGCATCTTCCCTATTCTTAGCTGA 693 0.4387 MGREIEEEQVGYTVEQLVSLNRYNPDILPDLENHVNDQVSSQTYSLDANLCLLRLYQFEPDKMSSQIVARILVKALMAMPAPDFSLCLFLIPERVQMEEQFKTLIVLSHYLETGRFRQFWDEAAKNRHIVEAVPGFEQAIQSNAIHVLSLTYQKVPRAVLAEAINIEGLSLDKFLEHQVATSGWAIEKSSQGKGQLIVLPRNEFNDPISKKNTADSVPLEHITRIFPILS 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1629 230 SUPERFAMILY "Winged helix" DNA-binding domain 134 227 IPR036390 -
Lal14g1629 230 Pfam CSN8/PSMD8/EIF3K family 64 190 IPR033464 -
Lal14g1629 230 Hamap Eukaryotic translation initiation factor 3 subunit K [EIF3K]. 5 230 IPR009374 GO:0003743|GO:0005737|GO:0005852
Lal14g1629 230 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 11 6 229 IPR009374 GO:0003743|GO:0005737|GO:0005852
Lal14g1629 230 Gene3D ARM repeat; domain 1 6 122 IPR016020 GO:0003743|GO:0005852|GO:0006446|GO:0043022
Lal14g1629 230 SUPERFAMILY ARM repeat 6 132 IPR016024 -
Lal14g1629 230 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT K 6 229 - -
Lal14g1629 230 ProSiteProfiles PCI domain profile. 44 203 IPR000717 -
Lal14g1629 230 Gene3D - 125 229 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1629 Lal-Chr14 16675770 16678852 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g1629 1 230 Eukaryotic Initiation Factors Gene Family AT4G33250 75.000 9.02e-127 356
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1629 K15028 - gmx:100306445 404.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1629 14 16675770 16678852 Lal14g1629 14 16675770 16678852 ECH
Lal14g1629 14 16675770 16678852 Lal7g1030 7 16449125 16452465 LSH