Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1623 ATGGCATCAAGAAGAAATGCTTTGAATCATATGATGATCCTTCAAATCTTGTTGATGACTTGCTTTGTATTGTTGGGCCAATGTGTCAAGCAAGAGAAGACAGAAGATCCTAAAGGGCTTGCTAAGATTGCAATAAATGCGAGTTTAGCAGAAGGTTCAAAGATATTGTCCTATGTTCATGAACTGAAATCCTCTGATGAAAGTAAAAAGAGTGATATATCAAGTGCCTTTAATGATTGTGATGAGGAATATACAGAAGCTATAGAGAATTTGAAGGAAGCAGCAACAACACTTGATAAAGGAGATTATAACAAAGTTAATATGTTAGTCTCAACTGCTATGACAAATGGTGACACATGTGAGAATGGTTTCACTGATATGGAGATTACTTCTCCTCTTACTAAACAAAATAGTTATTTCTCTGAGCTGTGTAGTAATGTTCTAGCCATTACAAAACAATTAGCCTGA 468 0.3504 MASRRNALNHMMILQILLMTCFVLLGQCVKQEKTEDPKGLAKIAINASLAEGSKILSYVHELKSSDESKKSDISSAFNDCDEEYTEAIENLKEAATTLDKGDYNKVNMLVSTAMTNGDTCENGFTDMEITSPLTKQNSYFSELCSNVLAITKQLA 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1623 155 PANTHER OS05G0360900 PROTEIN 20 153 - -
Lal14g1623 155 PANTHER PECTINESTERASE INHIBITOR-LIKE 20 153 - -
Lal14g1623 155 TIGRFAM PME_inhib: pectinesterase inhibitor domain 21 154 IPR006501 GO:0004857
Lal14g1623 155 SMART PMEI_2 13 150 IPR006501 GO:0004857
Lal14g1623 155 Gene3D Invertase/pectin methylesterase inhibitor family protein 19 155 IPR035513 -
Lal14g1623 155 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 21 154 IPR035513 -
Lal14g1623 155 Pfam Plant invertase/pectin methylesterase inhibitor 32 150 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1623 Lal-Chr14 16641234 16641701 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g1623 34 150 Carbohydrate Esterase AT5G53370 29.365 4.79e-07 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1623 - - gmx:100785210 135.191