Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1619 ATGGGTTTCTGTTCTGAGGAAAACATCACTACTATCTCTGGTTTCACAATAGGTCAAGCCATATATGAAGCAGCTCTAATCATAGCACTTCTAAGATGGATCTTGTGCTTGGTTTTAAAACTGATGAGGGATAGAAACAATGAATCTCTTCACACCCCATCTGATATAGAACCCTCTTGTGTGTCTTCTCAGATGATAAGGGACAACACTCTCTTGTTGACAACCTTTGGTGAGATTAAGGAAAGGCTGCAACCAGAAGAAACACAAGACAATACAACATGTGCTGTTTGTTTGAATCATCTGAACATGGAAGATGAGGTTAGAGAGTTGATGAACTGTTACCATGTGTTCCATAAAGAATGCATAGATACATGGTTGAACCATGACCATGATAATAACCATAACCCTACTTGTCCACTATGTAGAGCACCTTTGTTAACTCCTTCTTGTTTCTCATCATCATCATCTGAATCTTCTACTAATTGTGTTCCTCCTCCTCAACCTAGTTGGGCTGTGGAAAGACTTCTATATCTCTTTGGGGATGATCTCATGTCTTGTTGA 561 0.3939 MGFCSEENITTISGFTIGQAIYEAALIIALLRWILCLVLKLMRDRNNESLHTPSDIEPSCVSSQMIRDNTLLLTTFGEIKERLQPEETQDNTTCAVCLNHLNMEDEVRELMNCYHVFHKECIDTWLNHDHDNNHNPTCPLCRAPLLTPSCFSSSSSESSTNCVPPPQPSWAVERLLYLFGDDLMSC 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1619 186 Pfam Ring finger domain 93 142 IPR001841 -
Lal14g1619 186 SMART ring_2 94 141 IPR001841 -
Lal14g1619 186 SMART ringv_2 93 142 IPR011016 GO:0008270
Lal14g1619 186 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 75 148 IPR013083 -
Lal14g1619 186 PANTHER RING ZINC FINGER PROTEIN-RELATED 13 184 - -
Lal14g1619 186 ProSiteProfiles Zinc finger RING-type profile. 94 142 IPR001841 -
Lal14g1619 186 SUPERFAMILY RING/U-box 83 148 - -
Lal14g1619 186 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 13 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1619 Lal-Chr14 16615491 16616051 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g1619 13 183 C3H Transcription Factor Family AT5G20885 43.716 1.87e-36 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1619 K16281 - gmx:111138523 217.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1619 14 16615491 16616051 Lal14g1619 14 16615491 16616051 ECH
Lal14g1619 14 16615491 16616051 Lal7g1023 7 16394458 16398769 LSH