Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1616 ATGGAAACATTAGAACTAATTGATGCTCATCAAACTCAGTCATCATCATCTTCATCTTCTTCCATTGATAGCAACAACCACCCTTCTAAGACACCACCACCCTCTTCCTCTTCATCTTTGTGTCTCTCAGGTGTCTGCATAAATATTGGTAGCACCAAAAAAAATGATTTAAGTACTGACCTCAGACTTGGTCTTAGTATTTATGAATCTTCTCAATCTGAATTAGCTTTCAATTCTACCCCAAGGGATCATACTTATGATTGGCCACCAATTAAGTCCATATTGAGGAGCACCCTTGTTGAGAAACAAAACCAGCATAGACCCTCTTTGTTTGTCAAAGTCTACATGGAAGGCATTCTCATAGGTAGAAAATTGAATCTGATGGCACACCATAGCTATGATGGACTAGTAAAAGCTCTTGGTCATATGTTTAGGACCACCATTCTTTACCCTAACTCTCAACCAATTAATTATGGGAATTTCCATTTTCTAACTTATGAGGATAAAGAAGGTGACTGGCTTATGGTTGGAGATGTACCATGGGAGATGTTCTTGACTAGTGTGAAGAGGCTGAGGATCATAAGAGCTGAGAGATGCTAG 600 0.3917 METLELIDAHQTQSSSSSSSSIDSNNHPSKTPPPSSSSSLCLSGVCINIGSTKKNDLSTDLRLGLSIYESSQSELAFNSTPRDHTYDWPPIKSILRSTLVEKQNQHRPSLFVKVYMEGILIGRKLNLMAHHSYDGLVKALGHMFRTTILYPNSQPINYGNFHFLTYEDKEGDWLMVGDVPWEMFLTSVKRLRIIRAERC 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1616 199 SUPERFAMILY CAD & PB1 domains 105 193 - -
Lal14g1616 199 Pfam AUX/IAA family 76 196 IPR033389 -
Lal14g1616 199 ProSiteProfiles PB1 domain profile. 109 198 IPR000270 GO:0005515
Lal14g1616 199 PANTHER AUXIN-RESPONSIVE PROTEIN IAA31 16 199 - -
Lal14g1616 199 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 16 199 IPR003311 GO:0005634|GO:0006355
Lal14g1616 199 Gene3D - 103 199 - -
Lal14g1616 199 MobiDBLite consensus disorder prediction 1 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1616 Lal-Chr14 16594971 16596506 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g1616 101 193 B3 DNA Binding Superfamily AT2G46530 34.043 1.68e-09 54.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Lal14g1616 AUX_IAA 9.6e-31 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1616 K14484 - gmx:100818083 253.447
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1616 14 16594971 16596506 Lal14g1616 14 16594971 16596506 ECH
Lal14g1616 14 16594971 16596506 Lal7g1020 7 16377232 16378809 LSH
Lal14g1616 14 16594971 16596506 Lal19g1165 19 15141168 15142744 LSH