Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1612 ATGGCCACCGAGGCCAGCTTGGACGATGGTACTAATCCAAGTGAGATGATAGGATCAGCAAGTAATCCTCAAGTTCCAGGCCCTGACAATACTCAAGAAATGAAAAGGAGGCTGCAGGATTCGAAGACAAACAAGGAGAAGGAAGGAAGCAAGAAAACGGTTTCGTTCTATAAGCTTTTCTCATTTGCGGATTCTTGGGATCATCTATTGATGTTTATTGGGACAATAAGTGCTGTTGCGAATGGAATATCATTCCCTCTAATGACTATAATTATTGGAGATACAATTGATGCTTTTGGAGGAAATGCTAACACTACACAAGTAGTTCATGAAGTTTCCAAGGCATCTCTGAAGTTTGTATACATGGGTGCTGGTGCCTTCGTGGCAGCGTTTTTGCAGGTTTCTTGTTGGGTGATCACTGGGGAGAGACAAGCTGCAAGAATAAGAGGCTTATACCTCAAAGCAATTTTGAGGCAAGACGTTAGCTTCTTTGACAAGGAAACTAACAGTGGCGAGGTTGTTGGAAGGATGTCAGGTGACACAGTTCTTATTCAAGATGCCATGGGTGAGAAGGTAGGAAAGTTCATACAGTATGTCGCAGCATTTTTAGGAGGTTTTGTCATAGCATTCATCAAGGGATGGCTTCTAAGCTTTGTCTTGCTATCTTCAGTTCCACCACTAGTCTTCGGTGGTTATCTAATGACCTTTGCTTTTGTAAAGATGGCATCCCGTGGACAAGCAGCGTATTCTGAGGCAGCAACTGTAGTAGAGCGTACAATTGGATCAATTAGAACTGTTGCATCATTTACCGGTGAGAAACAAGCTATAGCTCAATACAACCGATCCTTGATCAAAGCTTACAGGATTGGTGTGCAAGAGGGAGTGGCTGCTGGTTTTGGCCTTGGTTCACTTCGCTTATTTGCTTATAGTAGTTATGGGTTGGCCATATGGTATGGAGGGAAGATGGTACTAGAGAAAGGATATACAGGAGGTGAAGTCATAAGTGTATTTTTTGCACTATTGACTGGATCCTTGTCACTGGGGCAGGCATCTCCAAGCTTAACTGCTTTTGCTGTGGGGCAAGCTGCAGCCTTTAAAATGTTTGCAACAATAAAGAGGCAGCCAGATATTGATGCTTATGAGACCGATGGTCGTCGATTAGATGATATTGATGGAGATATAGAATTTAAGGAGGTTTGTTTTTGTTATCCTACAAGAACAGATGAATTGATATTCAATAGATTTTCTATTTCAATATCAAGTGGCACTACTGCAGCTTTGGTAGGACAAAGTGGGAGTGGGAAGTCAACAGTTATTAGTTTGATACAGAGATTTTATGATCCACAAGCTGGTAAAGTTCTCATTGATGGTATCAACCTCAGAGAATTTCAACTGAAATGGATCAGACAGAAAATAGGCCTGGTCAGCCAAGAGCCAGTTCTCTTTGCTTGTAGCATTAAGGAGAATATTGCATATGGTAAGAATGGTGCAACAAATGATGAAATCAGAGCTGCTGCAGAACTTGCTAATGCTGCTAAATTCATTGATAAATTTCCTCACGGGCTTGACACAATGGTCGGAGAGCATGGAGCTCAACTTTCTGGAGGTCAAAAGCAAAGGGTTGCTATAGCAAGAGCAATTCTGAAAGACCCGAGAATTCTACTCCTTGATGAAGCTACGAGTGCTCTAGATGCTGAATCTGAGAGAGTAGTGCAAGAGACACTGGACAGAATAATGATAAACAGAACAACTATCATTGTAGCTCACCGCTTAAGCACAATAAGGAATGCTGACATGATTGCTGTTATCAACCAAGGAAAAGTAGTAGAGAAAGGTTCTTATGCTGAGCTCACCGAAGAACCTGATGGAGCTTTTAGCCAGCTCATTAAATTACAAGAAATTAAAATAGAGTCAAAACAAAATGGTGCTAATGAATCATGCAGTCAAGAAAACTTTGTAGATTCAGTACAACAATTGAGCCAAAGGTTTTCTTTAAGTCGCGGATCATCTGGAACTGGAAACAGCAGTAGTCACTCGTTCAGAACATCAAATATTATGCCTACCAAATTTGCTCTATTGGAAACATCAAAAGTTCTTCCTTCAGCTGCATTACATAAACCTCCAAAAGTCTCATTTCTCCGCCTAGCTTATCTTAACAAACCTGAAATCTCAGTGTTACTCATAGGGACTCTAGCAGCAGCAGTAACTGGGGCAATATTACCAACTATGGGGCTTCTTACATCGAACATGATAAATACTTTCTATGAGCCTGCAGATCAGCTCCGTAAAGACTCAAAGTTTTGGGCATTAATCTTTATTGCCCTTGGTGTGACTGCCATCTTGTTTCATCCTTTGAGGTCATACTTTTTTTCTGTAGCTGGCTCTAAGTTGGTAAAAAGGATCCGGCTAATGTGTTTTGAGAAAATAATTCACATGGAAGTAGGTTGGTTTGATAAACCTGAGCACTCCAGTGGAGCACTTGGAGCAAGGCTGTCAACTGATGCTGCTTCTATTCGAGCTTTGGTTGGCGATGCACTTGGTTTGTTGGTTCAAGATATCGTTACAGCAATTACAGCCTTGGTAATCTCTTTTGAGGCAAATTGGCAGCTTTCTCTCATCGTTCTTGCATTGCTACCTCTACTTTTAGTAAATGGACACGTGCAAGTGAAATCCATGCAAGGATTCAGCACAGATGCAAAGAAACTATATGAGGAAGCAAGTCAAGTAGCAAATGATGCAGTGGGGAATATCAGAACAGTCACTTCTTTCTGTGCCGAAGAGAAGGTGATGGAGTTATACCATAAGAAATGTGAAGGACCAATGAAGACAGGTATAAGACAGGGTTTAGTCAGTGGAACTGGTTTTGGGTTATCACTCCTCTTTCTGTACTCCGTCTATGCGTGCAGCTTTTATGCTGGAGCCAGACTTGTTGAGGATGGCAAAGCAGTAGCCTCAGATGTTTTCCGTGTATTTTACTCTCTCACAATGGCAGCTATAGCATTATCTCAATCTGGCTTCATGTCCCCAGGTGTGACTAAAGCAAAAAGTTCTGCTGCTTCAATATTTGCTATTCTTGATCAGAAATCACAAATAGACCCAAGTGAAGAGTCTGGAATGATATTGCAAGATGTGAATGGAGAGATTGAGTTCCACCATGTCACTTTCAAGTATCCAACCAGGCCTAATGTTCATATATTTAGAGATCTTTCCTTGACCATTCATTCAGGAAAGACAGTTGCTCTAGTAGGCGAAAGTGGAAGTGGAAAGTCAACAATGATCTCATTGTTGCAGAGATTTTATGACCCAAATTCAGGTCAGATTACACTAGATGCAATAGAAATACAAAAGCTACAACTAAAATGGTTTAGGCAGCAGATAGGCCTTGTAAGCCAGGAGCCTGTGTTGTTCAATGACACCATTCGAGCCAACATCGCATATGGAAAAGGAGGTGATGCAGCAGAGACAGAAATTATAGCTGCAGCAGAACTGGCAAATGCCCACAAGTTCATTAGCTCTTTGCAAAAGGGGTATGATACAATAGTAGGGGAAAGAGGGATTCAACTATCTGGAGGGCAGAAACAAAGGGTGGCAATTGCAAGAGCAATAGTGAAGAGTCCAAAAATATTACTACTAGATGAAGCAACTAGTGCACTTGATGCAGAGTCTGAAAAAGTGGTTCAGGATGCATTAGACAGAGTGAGGGCAGATAGAACCACAATAGTGGTGGCACACAGGTTATCCACCATAAAGGGTGCAGATTCAATTGCAGTGGTTAAAAATGGAGTCATTGCAGAGAAAGGTAAACATGAAAGTTTGGTCAACAAAGGTGGTATCTATGCTTCCTTAGTAGCACTTCACACTAGTGCTTCTTCATCTTAG 3879 0.4145 MATEASLDDGTNPSEMIGSASNPQVPGPDNTQEMKRRLQDSKTNKEKEGSKKTVSFYKLFSFADSWDHLLMFIGTISAVANGISFPLMTIIIGDTIDAFGGNANTTQVVHEVSKASLKFVYMGAGAFVAAFLQVSCWVITGERQAARIRGLYLKAILRQDVSFFDKETNSGEVVGRMSGDTVLIQDAMGEKVGKFIQYVAAFLGGFVIAFIKGWLLSFVLLSSVPPLVFGGYLMTFAFVKMASRGQAAYSEAATVVERTIGSIRTVASFTGEKQAIAQYNRSLIKAYRIGVQEGVAAGFGLGSLRLFAYSSYGLAIWYGGKMVLEKGYTGGEVISVFFALLTGSLSLGQASPSLTAFAVGQAAAFKMFATIKRQPDIDAYETDGRRLDDIDGDIEFKEVCFCYPTRTDELIFNRFSISISSGTTAALVGQSGSGKSTVISLIQRFYDPQAGKVLIDGINLREFQLKWIRQKIGLVSQEPVLFACSIKENIAYGKNGATNDEIRAAAELANAAKFIDKFPHGLDTMVGEHGAQLSGGQKQRVAIARAILKDPRILLLDEATSALDAESERVVQETLDRIMINRTTIIVAHRLSTIRNADMIAVINQGKVVEKGSYAELTEEPDGAFSQLIKLQEIKIESKQNGANESCSQENFVDSVQQLSQRFSLSRGSSGTGNSSSHSFRTSNIMPTKFALLETSKVLPSAALHKPPKVSFLRLAYLNKPEISVLLIGTLAAAVTGAILPTMGLLTSNMINTFYEPADQLRKDSKFWALIFIALGVTAILFHPLRSYFFSVAGSKLVKRIRLMCFEKIIHMEVGWFDKPEHSSGALGARLSTDAASIRALVGDALGLLVQDIVTAITALVISFEANWQLSLIVLALLPLLLVNGHVQVKSMQGFSTDAKKLYEEASQVANDAVGNIRTVTSFCAEEKVMELYHKKCEGPMKTGIRQGLVSGTGFGLSLLFLYSVYACSFYAGARLVEDGKAVASDVFRVFYSLTMAAIALSQSGFMSPGVTKAKSSAASIFAILDQKSQIDPSEESGMILQDVNGEIEFHHVTFKYPTRPNVHIFRDLSLTIHSGKTVALVGESGSGKSTMISLLQRFYDPNSGQITLDAIEIQKLQLKWFRQQIGLVSQEPVLFNDTIRANIAYGKGGDAAETEIIAAAELANAHKFISSLQKGYDTIVGERGIQLSGGQKQRVAIARAIVKSPKILLLDEATSALDAESEKVVQDALDRVRADRTTIVVAHRLSTIKGADSIAVVKNGVIAEKGKHESLVNKGGIYASLVALHTSASSS 1292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1612 1292 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 42 1288 - -
Lal14g1612 1292 SUPERFAMILY ABC transporter transmembrane region 52 376 IPR036640 GO:0005524|GO:0016021
Lal14g1612 1292 Pfam ABC transporter 1067 1216 IPR003439 GO:0005524
Lal14g1612 1292 Pfam ABC transporter 413 561 IPR003439 GO:0005524
Lal14g1612 1292 MobiDBLite consensus disorder prediction 1 47 - -
Lal14g1612 1292 Gene3D - 1039 1291 IPR027417 -
Lal14g1612 1292 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1048 1285 IPR003439 GO:0005524
Lal14g1612 1292 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 727 1013 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lal14g1612 1292 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1037 1285 IPR027417 -
Lal14g1612 1292 SUPERFAMILY ABC transporter transmembrane region 708 1028 IPR036640 GO:0005524|GO:0016021
Lal14g1612 1292 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 385 632 IPR027417 -
Lal14g1612 1292 CDD ABC_6TM_Pgp_ABCB1_D2_like 716 1031 - -
Lal14g1612 1292 Gene3D - 392 646 IPR027417 -
Lal14g1612 1292 PANTHER - 42 1288 - -
Lal14g1612 1292 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 394 630 IPR003439 GO:0005524
Lal14g1612 1292 CDD ABC_MTABC3_MDL1_MDL2 1048 1283 - -
Lal14g1612 1292 SMART AAA_5 421 593 IPR003593 -
Lal14g1612 1292 SMART AAA_5 1075 1268 IPR003593 -
Lal14g1612 1292 MobiDBLite consensus disorder prediction 33 47 - -
Lal14g1612 1292 CDD ABC_MTABC3_MDL1_MDL2 394 632 - -
Lal14g1612 1292 CDD ABC_6TM_Pgp_ABCB1_D1_like 71 367 - -
Lal14g1612 1292 Gene3D ABC transporter type 1, transmembrane domain 117 980 IPR036640 GO:0005524|GO:0016021
Lal14g1612 1292 ProSitePatterns ABC transporters family signature. 533 547 IPR017871 GO:0005524
Lal14g1612 1292 ProSitePatterns ABC transporters family signature. 1188 1202 IPR017871 GO:0005524
Lal14g1612 1292 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 72 358 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lal14g1612 1292 MobiDBLite consensus disorder prediction 1 29 - -
Lal14g1612 1292 Pfam ABC transporter transmembrane region 71 345 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lal14g1612 1292 Pfam ABC transporter transmembrane region 726 997 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1612 Lal-Chr14 16573930 16582127 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g1612 45 1286 Calmodulin-binding Proteins AT2G36910 42.891 0.0 1014
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1612 K05658 - gmx:100777713 1957.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1612 14 16573930 16582127 Lal14g1612 14 16573930 16582127 ECH