Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1606 ATGGCATCTGATCTGAATTCAGGGTTGTTGAAGAAAACATCTGTTTTTGGGTTGAAAGCATGGGAGTTAATGGGGTTAATAGTTGGATTGTTCATCATAGTCATTCTTGTGGTGCTATCAATATGTCTTTCATCAAGAAAGAAATCCAGAAGAGTCAATGGCATGCTTCCCCTTAGCCAAATGTTATCTGTTACAGAAGAGATCAAAGAGATTAGAGTTGATCAAGGGTCAGCAAATAATCATCAGCAGAGTGGATCTTTTATGAGCTTGTATGACAAAATTAGTGACAGGAATTCCGGAAAGGGTATGATCATAACAAAAAATGGGGATAATAGCAGTCAATCAGGCTCATTTGTTCATATTGAGAAAGATGCTTGTGGCTCTCAATCAGGTGAAGAAAGTGGTGAGAAGTCTATTTATAGGTCCTCTTCTCATCCGATAACCGCACCATCCCCTTTGTCTGGTCTGCCTGAATTCTCTCAGCTTGGCTGGGGGCACTGGTTTACATTAAGGGACTTGGAAGTTGCAACAAACAGGTTTTCAAAAGACAATATTATCGGTGAAGGTGGATATGGAGTTGTTTATCGAGGTCAACTAGTCAATGGCAGTCCTGTAGCTGTTAAGAAGCTTCTTAATAATCTAGGACAAGCTGAAAAGGAATTCAGGGTGGAAGTTGAGGCTATTGGTCATGTAAGGCATAAGAACTTGGTCAGACTTTTGGGCTATTGCATTGAAGGCACACACAGGTTGTTGATTTATGAGTATGTTAACAACGGCAATTTAGAACAATGGCTTCATGGAGCCATGCGGCAGTATGGTTTTCTTACTTGGGATGCCCGGATTAAAATTCTCCTTGGAACAGCTAAAGCTCTCGCTTACTTGCATGAGGCAATTGAGCCTAAAGTTGTACATCGAGACATAAAGTCAAGCAATATTCTAATTGATGATGACTTCAATGCCAAAATATCTGACTTTGGGCTTGCCAAGTTACTGGGTGCTGGAAAAAGTCATATCACAACTCGAGTAATGGGCACTTTTGGATATGTGGCTCCAGAATATGCCAATTCTGGCTTACTAAATGAGAAGAGTGATGTTTATAGTTTTGGAGTATTGCTTCTTGAAGCAATTACTGGAAGAGACCCAGTGGATTATAGCCGACCAACAGCTGAGGTAAATTTGGTTGATTGGCTCAAGTTGATGGTAGGGAGTAGACGTGCCGAAGAGGTGGTGGACCCCAACATTGAAACCAGGCCATCAACAAGTTCCCTTAAACGAGCCCTTTTAACTGCTTTGAGGTGCGTTGATCCATATTCTGAGAAAAGACCAAAGATGAGTCAAGTTGTCCGTATGCTTGAATCAGAGGAATATCCCATTCCCCGAGAGGTAACTATAATGTTGGATATAGTAAGAAAGTATGGATCACTTGATGATTGTGGAATTGGAGTAGCTAACTTGTCACTTGATGAACCGGATAGAAGACGGCGAAAGAGTCAGGCAGAAAATATAGAGACGGGGACGGAAAAGGAGGCTTCAGATACTGATAAGAGTGATAATCCAGAATTCAATTCCAATGGCAGAAGGAAACAAAGGAAGTAG 1596 0.4129 MASDLNSGLLKKTSVFGLKAWELMGLIVGLFIIVILVVLSICLSSRKKSRRVNGMLPLSQMLSVTEEIKEIRVDQGSANNHQQSGSFMSLYDKISDRNSGKGMIITKNGDNSSQSGSFVHIEKDACGSQSGEESGEKSIYRSSSHPITAPSPLSGLPEFSQLGWGHWFTLRDLEVATNRFSKDNIIGEGGYGVVYRGQLVNGSPVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGTHRLLIYEYVNNGNLEQWLHGAMRQYGFLTWDARIKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDDDFNAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVLLLEAITGRDPVDYSRPTAEVNLVDWLKLMVGSRRAEEVVDPNIETRPSTSSLKRALLTALRCVDPYSEKRPKMSQVVRMLESEEYPIPREVTIMLDIVRKYGSLDDCGIGVANLSLDEPDRRRRKSQAENIETGTEKEASDTDKSDNPEFNSNGRRKQRK 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1606 531 SMART serkin_6 180 451 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal14g1606 531 MobiDBLite consensus disorder prediction 127 147 - -
Lal14g1606 531 ProSitePatterns Serine/Threonine protein kinases active-site signature. 302 314 IPR008271 GO:0004672|GO:0006468
Lal14g1606 531 MobiDBLite consensus disorder prediction 489 531 - -
Lal14g1606 531 CDD STKc_IRAK 186 452 - -
Lal14g1606 531 PANTHER RECEPTOR-LIKE KINASE PLANT 2 461 - -
Lal14g1606 531 PANTHER RECEPTOR-LIKE KINASE PLANT 488 531 - -
Lal14g1606 531 SUPERFAMILY Protein kinase-like (PK-like) 164 461 IPR011009 -
Lal14g1606 531 Gene3D Phosphorylase Kinase; domain 1 160 255 - -
Lal14g1606 531 ProSitePatterns Protein kinases ATP-binding region signature. 186 209 IPR017441 GO:0005524
Lal14g1606 531 PANTHER OS01G0323000 PROTEIN 488 531 - -
Lal14g1606 531 PANTHER OS01G0323000 PROTEIN 2 461 - -
Lal14g1606 531 ProSiteProfiles Protein kinase domain profile. 180 438 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal14g1606 531 MobiDBLite consensus disorder prediction 131 147 - -
Lal14g1606 531 Gene3D Transferase(Phosphotransferase) domain 1 256 462 - -
Lal14g1606 531 Pfam Protein kinase domain 181 449 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1606 Lal-Chr14 16515411 16524143 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g1606 17 454 Trihelix Transcription Factor Family AT1G70460 41.309 2.67e-95 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Lal14g1606 Pkinase 1.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1606 - - gmx:100793499 845.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1606 14 16515411 16524143 Lal14g1606 14 16515411 16524143 ECH
Lal14g1606 14 16515411 16524143 Lal7g1008 7 16300919 16306375 LSH
Lal14g1606 14 16515411 16524143 Lal19g1156 19 15078970 15082595 LSH
Lal14g1606 14 16515411 16524143 Lal17g1450 17 15899194 15903762 PCT
Lal17g1450 17 15899194 15903762 Lal14g1606 14 16515411 16524143 PCT