Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1598 ATGGTAGCTGAAGCGGAAATTATTTACCAGCAGAGTATTCCGAGCATGTTAGACGTAAAGTATCGACTTTGCGTAGCGCAAGAACACAACGTCAAGGTTGAGGTTTCACCCACCTCCCCTTCTATCCAAATATTTAGCCAAGTTCGGGTTTCCTCTGAATCCTTTTCTACTGAAACTTCTTCATTTGAATCGGCTGTGACTTGCTCTGAGATAATCAAAGATTCCATTATGGAGACTCCTGCAGCCAAGTTTATCCCAAATGTGCGTTCTGGTTGCTATACTGAAATTGGACCAAGGGTATGTATGGAAGATGAACACATTCAGATTGATGATCTAGCTTCCCATCTTGGATTTGTGTTCCAAGGCCCGATACCAAGCGCATTTTATGCAGTTTTTGATGGGCATGGAGGGCATGATGCAGCTGCTTTTGTTAAGAGGAATGCAATGAGATTATTTTTTGAAGATGCTAATATGCTGCAGTCATATGATACTGATGCCTTTTTTCTGAAGAAGCTGGAGGAGTCTCATCGAAGAGCTTTTTTGCGGGCAGACCTTGCCTTGGCTGGTGAGAGAAGTGTTAATAGTTCATGTGGGACTACAGCAATTACTGCCCTTGTACTTGGAAGGCATTTGATGGTTGCTAATGCCGGTGACTGTCGAGCAGTACTTTGCAGAAGAGGTAAAGCTGTTGAGATGTCTCAAGATCACAGGCCAAGTTACTTACCAGAACAGAGGAGAGTTGAGGAGCTAGGTGGCTTCGTTGACGATGGATATCTCAATGGTTATCTTTCAGTAACTCGTGCACTTGGGGATTGGGACTTGAAATTTCCACTAGGTGATGCATCTCCTCTTATTGCTGATCCAGACGTTCAAATGGTTACATTAACAGAAGAGGATGAGTTTTTGATCATTGGGTGTGATGGGATATGGGATGTAATGTCCAGCCAATATGCAGTTAGTCTTGCTCGCCGTCGACTAAGAAGGCATGATGACCCACAGCAATGTGCAAGAGAACTTGTCAAGGAAGCACTGCGCCTAAACACGTCAGATAATCTCACAGTGATTGTTATATGCCTGTCCACAGTTGAAAGCATCATCGAATCTTGTCCGCCACGACGACGAAGATTTAAAGCTTGCAGCGTGTCCGAAGAAACCGGTAACTGA 1164 0.4416 MVAEAEIIYQQSIPSMLDVKYRLCVAQEHNVKVEVSPTSPSIQIFSQVRVSSESFSTETSSFESAVTCSEIIKDSIMETPAAKFIPNVRSGCYTEIGPRVCMEDEHIQIDDLASHLGFVFQGPIPSAFYAVFDGHGGHDAAAFVKRNAMRLFFEDANMLQSYDTDAFFLKKLEESHRRAFLRADLALAGERSVNSSCGTTAITALVLGRHLMVANAGDCRAVLCRRGKAVEMSQDHRPSYLPEQRRVEELGGFVDDGYLNGYLSVTRALGDWDLKFPLGDASPLIADPDVQMVTLTEEDEFLIIGCDGIWDVMSSQYAVSLARRRLRRHDDPQQCARELVKEALRLNTSDNLTVIVICLSTVESIIESCPPRRRRFKACSVSEETGN 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1598 387 ProSitePatterns PPM-type phosphatase domain signature. 128 136 IPR000222 GO:0043169
Lal14g1598 387 SUPERFAMILY PP2C-like 83 360 IPR036457 -
Lal14g1598 387 SMART PP2C_4 79 357 IPR001932 -
Lal14g1598 387 Gene3D - 74 364 IPR036457 -
Lal14g1598 387 SMART PP2C_SIG_2 104 359 IPR001932 -
Lal14g1598 387 Pfam Protein phosphatase 2C 99 351 IPR001932 -
Lal14g1598 387 CDD PP2Cc 89 359 IPR001932 -
Lal14g1598 387 PANTHER PROTEIN PHOSPHATASE 2C 1 380 IPR015655 GO:0004722|GO:0006470
Lal14g1598 387 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 1 380 - -
Lal14g1598 387 ProSiteProfiles PPM-type phosphatase domain profile. 89 359 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1598 Lal-Chr14 16466532 16468996 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g1598 1 384 PP2C-type Phosphatase Gene Family AT1G48040 55.039 1.52e-136 393
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1598 K14803 - gmx:100775577 612.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1598 14 16466532 16468996 Lal14g1598 14 16466532 16468996 ECH
Lal14g1598 14 16466532 16468996 Lal19g1143 19 14948407 14950797 LSH