Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1593 ATGTTTGTGCCTAATATGTGGAATTTAGGTGCAGATATGAATGTTATTCTGTGCTTCCTATGTTTCTTTCTTTTCATTAAAGCATCAGAAGAAATAAATGTGGGAACCTATGAATCTGATAGAATAGTAGATCTTCCTGGCCAACCTTCAAACCCATCAATCTCACACTTTTCAGGTTATATCACTGTCAATGAAGACCATGGGAGGGCCCTTTTCTATTGGTTCTATGAAGCTCAATCTGAACCGTCCAACAAGCCTCTCCTTCTCTGGCTCAATGGAGGACCTGGATGCTCCTCTATTGGGTATGGTGCAGTTGTTGAAATAGGGCCTCTTCTAATCAATAAAGATGGTGATGGATTACATTTCAACACATTCTCATGGAACCAAGAAGCAAATTTGTTATTTGTGGAGTCCCCTGTTGGAGTTGGCTTTTCTTACACAAACACTTCTTCTGATCTCACCATATTGGAGGATGGTTTTGTGGCTGAGGATGCCTACAACTTCTTAGTGAATTGGCTAGAAAAATTCCCACACTTCAAATCCAGGGACTTTTACATAGCAGGAGAAAGCTATGCAGGCCACTATATCCCTCAGCTTGCAGAACTAGTCTTTGATCGAAACAAAGATACAAACAAATACCCCTTTATTAATCTTAAAGGTTTCATTGCAGGGAATCCAGAAACTGAAGATTATTATGACAATAAAGGCCTTCTAGAATATGCATGGAGTCATGCAGTTATATCAGACCAACAATATGACAAAGCAAAACAAGTTTGTGATTTTAAGAAATCTGAATGGTCTAAGGAATGCAACCAAGCCATGAATGGAATCTTCCAAGAATACTCAGAAATTGACATCTACAACATTTATGTCCCAAAATGTCGTCTTAATAGCTCATCCTCAATGACAATAGTTCATGATAGTAAGAGTCATGGCCCTGAATCATTTACAAAGGTGAGAAATGATTATAGAGTAGGAAGAATGAGAATCTTTGGGGGCTATGATCCATGTTATTCCACATATGCAGAAGAATATTTTAATAGGATAGATACTCAATCATCTTTACATGCAAACATTGAAAGAAGAAATACTAACATAACATGGAAGGTTTGCAATGATTCCATATTGAGGGCTTACAACTTCTCTGTTTTTACGGTCTTACCCATCTACACCAAACTCATCAAGGGTGGGCTTAAGATATGGATTTACAGTGGTGATGCAGATGGCAGAGTACCTGTGATTGGGACACGGTACTGCATTGAAGCTCTAGGATTACCTCTTAAGTCTAGTTGGCGGTCTTGGTACCATGATAATCAGGTTGGAGGAAGAATAGTGGAGTATGAAGGGGTGACATATGTGACAGTGAGAGGAGCTGGTCACTTGGTTCCTCTGAACAAGCCAAGTGAAGCTCTCACCATTATTCATTCTTTCCTAACAGGGGACCATCTCCCTACTCACCTATAA 1464 0.3941 MFVPNMWNLGADMNVILCFLCFFLFIKASEEINVGTYESDRIVDLPGQPSNPSISHFSGYITVNEDHGRALFYWFYEAQSEPSNKPLLLWLNGGPGCSSIGYGAVVEIGPLLINKDGDGLHFNTFSWNQEANLLFVESPVGVGFSYTNTSSDLTILEDGFVAEDAYNFLVNWLEKFPHFKSRDFYIAGESYAGHYIPQLAELVFDRNKDTNKYPFINLKGFIAGNPETEDYYDNKGLLEYAWSHAVISDQQYDKAKQVCDFKKSEWSKECNQAMNGIFQEYSEIDIYNIYVPKCRLNSSSSMTIVHDSKSHGPESFTKVRNDYRVGRMRIFGGYDPCYSTYAEEYFNRIDTQSSLHANIERRNTNITWKVCNDSILRAYNFSVFTVLPIYTKLIKGGLKIWIYSGDADGRVPVIGTRYCIEALGLPLKSSWRSWYHDNQVGGRIVEYEGVTYVTVRGAGHLVPLNKPSEALTIIHSFLTGDHLPTHL 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1593 487 PRINTS Carboxypeptidase C serine protease (S10) family signature 123 135 IPR001563 GO:0004185|GO:0006508
Lal14g1593 487 PRINTS Carboxypeptidase C serine protease (S10) family signature 136 146 IPR001563 GO:0004185|GO:0006508
Lal14g1593 487 PRINTS Carboxypeptidase C serine protease (S10) family signature 172 197 IPR001563 GO:0004185|GO:0006508
Lal14g1593 487 PRINTS Carboxypeptidase C serine protease (S10) family signature 450 463 IPR001563 GO:0004185|GO:0006508
Lal14g1593 487 Gene3D - 386 480 - -
Lal14g1593 487 Gene3D alpha/beta hydrolase 36 296 IPR029058 -
Lal14g1593 487 Gene3D - 337 375 - -
Lal14g1593 487 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 26 12 485 - -
Lal14g1593 487 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 12 485 IPR001563 GO:0004185|GO:0006508
Lal14g1593 487 SUPERFAMILY alpha/beta-Hydrolases 38 484 IPR029058 -
Lal14g1593 487 ProSitePatterns Serine carboxypeptidases, serine active site. 186 193 IPR018202 GO:0004185
Lal14g1593 487 Pfam Serine carboxypeptidase 46 479 IPR001563 GO:0004185|GO:0006508
Lal14g1593 487 ProSitePatterns Serine carboxypeptidases, histidine active site. 450 467 IPR033124 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1593 Lal-Chr14 16438898 16443894 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g1593 361 483 Calmodulin-binding Proteins AT2G22960 30.645 7.68e-14 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1593 K16297 - gmx:100815141 827.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1593 14 16438898 16443894 Lal14g1593 14 16438898 16443894 ECH