Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1567 ATGTATCTTACCAACAGCAAAGGTTCCATGTCAAATTCCGGCGCCGATGGTATCTCCGACCAATTTCCGGCAGGTCTTCGAGTTCTTGTAGTGGATGATGATCCCACGTGCCTCATGATCCTTGAGAGGATGCTGCGTACTTGTCTCTATCAAGTTACCAAATGTAACCGAGCTGAAATTGCACTGATGCTGTTAAGAGAGAATAAGAATGGTTTTGACATTGTTTTAAGCGATGTACATATGCCGGACATGGATGGATTTAAGCTTTTAGAGCACATTGGTTTGGAGATGGACCTTCCTGTTATTATGATGTCTGCAGATGATAGTAAAAATGTTGTTATGAAGGGTGTAACACATGGTGCCTGTGATTACCTCATTAAACCTGTTCGCATAGATTCTTTGAAGAACATATGGCAGCATGTTGTACGGAAGAGAAAGAATGAGTGGAAAGATACCGAGCAATCGGGTAGTGCTGAAGAAGGAGATCGACAGCTAAAGGCATCTGATGATGCAGATTATTCATCCTCAGCAAATGAAGGCAGACAGAGAAATTCAAAGAAAAGGAGGGATGAGGACGAGGATACAGACGAGAGAGATGACACATCCGCCCTAAAGAAGCCACGAGTAGTTTGGTCAGTTGAGCTCCATCAACAGTTTGTGGCTGCTGTGGATCAAATAGGAATAGACAAGGCTGTTCCAAAAAAAATTCTGGAATTGATGAACGTTCCTGGGCTCACTAGAGAAAATGTTGCCAGCCATCTCCAGAAATACCGTCTGTATCTTCGAAGGCTAAGTGGAGTTTCTCAGCACCCGAATAACTCTTTCCTCAGCCAACAAGATGCAACTTTTGGGTCAATATCTTCAATTAATGATCTTCAAACTCTTGCAGCTGCTGGACAGCTTCCTGCACAAAGTTTAGCCACACTTCAAGCAGCAGGACTTGGTAAATCAACTGCAAAAGCAGGCGTACCCATGCCTCTCATGGACCAAAGAAACCTTTTCAGCTTTGAAAACCCAAGGTTAAGATTTGGAGAAGGGCAACAACAACATTTGAACATCAGTAAATCAATAAACTTACTTCCTGGAATGCGTACCAACATGGAGCCAAAGCAGCTTGCCAATTTGCACCAATCTACCCAATCTATTAGCAACTTGAATATACGAGTCAATGCTTCTACTACACAGAGCAACCCCTTATTGATGCAGATAAAACAATCCCAACCTAAAGGTCAGATGTTAAATGAAAATACTGGTCTTGCTCCCAAACTTTCATCATCTTTTGGACAGCCTAATAGAAGTGGAATTTTTTATGGCCCTCTTGGTAAAAATGGCATTGCTACTAGTAATGTAGCATCTGCACAAAACTCTTTCATGATGAGTTTTCCTATGAATCAAACCCCTGAAATGTCCGTCAGTAGTTTCCCTCTTGGAAGCACTCCGGGTATATCTAGTGTCACAACAAAAGGCTCCTTTCAAGAGGAAGTTACTTCGGGAATTAAAGAAGACGGCGGATTTGTTCCAAGTTATGATATTTTTACTGAAATGCACCATCATAAGTCCCATGACTGGGAAATAACAAGCCCAGGCCTGACATATGCTGCCTCTCAGCCTGCAAATCCATTACAAGGTAATATAAATGTCTCACCGTCAATTTTAGTTCAACAGGGATTTTATCCTACCCAACAAACTGGACTAAATAAAGACACCCCTTTGATGGAAAAAGCCTTCTTCTCTCTAGGAGAAGGCTTGGAACAAAGTAATCTCCAAAATGCTGATCAGCACCTTAACACGCTTGTTGATAATTCAGTGAGGGTTAAGGTTGAAAGAATTCCTGATGAAAGCTCTCAAAGTAACCTCTTCCCTGAGCACTATGGGCAAGAGGATCTTCTGAGTGCACTTCTGAAACAGCAAGAAGGCGTTGGACCAGTAGAGAATGAGTATGATTTTGATGGATATTCTCTGGACAACATTCATGTCTAA 1980 0.4197 MYLTNSKGSMSNSGADGISDQFPAGLRVLVVDDDPTCLMILERMLRTCLYQVTKCNRAEIALMLLRENKNGFDIVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADDSKNVVMKGVTHGACDYLIKPVRIDSLKNIWQHVVRKRKNEWKDTEQSGSAEEGDRQLKASDDADYSSSANEGRQRNSKKRRDEDEDTDERDDTSALKKPRVVWSVELHQQFVAAVDQIGIDKAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLSGVSQHPNNSFLSQQDATFGSISSINDLQTLAAAGQLPAQSLATLQAAGLGKSTAKAGVPMPLMDQRNLFSFENPRLRFGEGQQQHLNISKSINLLPGMRTNMEPKQLANLHQSTQSISNLNIRVNASTTQSNPLLMQIKQSQPKGQMLNENTGLAPKLSSSFGQPNRSGIFYGPLGKNGIATSNVASAQNSFMMSFPMNQTPEMSVSSFPLGSTPGISSVTTKGSFQEEVTSGIKEDGGFVPSYDIFTEMHHHKSHDWEITSPGLTYAASQPANPLQGNINVSPSILVQQGFYPTQQTGLNKDTPLMEKAFFSLGEGLEQSNLQNADQHLNTLVDNSVRVKVERIPDESSQSNLFPEHYGQEDLLSALLKQQEGVGPVENEYDFDGYSLDNIHV 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1567 659 MobiDBLite consensus disorder prediction 148 169 - -
Lal14g1567 659 SUPERFAMILY Homeodomain-like 204 263 IPR009057 -
Lal14g1567 659 Gene3D - 203 265 - -
Lal14g1567 659 SMART REC_2 26 138 IPR001789 GO:0000160
Lal14g1567 659 CDD REC_typeB_ARR-like 28 142 - -
Lal14g1567 659 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 206 259 IPR006447 GO:0003677
Lal14g1567 659 PANTHER TWO-COMPONENT RESPONSE REGULATOR 10 632 - -
Lal14g1567 659 PIRSF RR_ARR_type-B 4 651 IPR017053 GO:0003677|GO:0003700|GO:0009736
Lal14g1567 659 Pfam Myb-like DNA-binding domain 208 258 IPR001005 -
Lal14g1567 659 MobiDBLite consensus disorder prediction 181 203 - -
Lal14g1567 659 ProSiteProfiles Response regulatory domain profile. 27 142 IPR001789 GO:0000160
Lal14g1567 659 Pfam Response regulator receiver domain 28 136 IPR001789 GO:0000160
Lal14g1567 659 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 205 262 IPR017930 -
Lal14g1567 659 Gene3D - 26 162 - -
Lal14g1567 659 PANTHER TWO-COMPONENT RESPONSE REGULATOR 10 632 IPR045279 GO:0009736
Lal14g1567 659 MobiDBLite consensus disorder prediction 148 203 - -
Lal14g1567 659 SUPERFAMILY CheY-like 25 150 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1567 Lal-Chr14 16283864 16288058 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g1567 60 659 Response Regulator Gene Family AT3G16857 48.466 4.37e-167 490
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Lal14g1567 Response_reg 2.2e-22 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1567 - K14491 gmx:100814930 1017.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1567 14 16283864 16288058 Lal14g1567 14 16283864 16288058 ECH
Lal14g1567 14 16283864 16288058 Lal19g1122 19 14808109 14811127 LSH