Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1559 ATGGCAGGTAACCAAGAGGGTAAGAAGAAGATGGCCGTTCTCGGCGTGTCGGCGGTGCTTCTTGTGGCGATGGTGGCTTGCGTGGCCGTTGGTTTGACCCGTGGCGGCGAAGGTGGTGAAGAGGAAGGAAAGAGTATAGCAAAAAATCAGAAGAATGTTGAGATAGTGTGCCAGGCAGCAGAATTCAAAGAAACTTGCCATAAAAGTCTTGCAAAAGTATCAGAGGATGACACAGATTTGAAGGGGCTTATCATAGCAGCTTTCAATGCAACTGCTATTGAATTGTCTAACCAAATTAGCAATAGCTCCTTGTACAATGAGTTGGCCAAGGATAACATGACTAAACAGGCTATGGATGTGTGCAAGGAAGTGTTGGGTTATGCTGTTGATGATGTTCACAAAACTGTTCATACTTTGGATAGGTTTGATTTGAGCAAGCTCAACGAATATGCCTATGACCTCAAGGTTTGGCTCACAGGTACCCTCAGCCATCAATACACATGCTTGGATGCATTTGAGAACACAACCACCAATGCTGGCCAAACAATGACCAAGGTGCTGAACACCTCTTTGGAGTTGAGCAACAATGCCATTGATATAGTGAATGGGTTGTCACATCTGTTCCAGGGTTTGAACTTGACCTCATTTACAACAAGTGTCAACAGTAACAGGAGGCTTCTCTCTACTGTAGATGATGATGGTTTCCCTTCATGGGTCACTGAAGGCCAAAGGCATCTCCTTCAGACTCCTGGACTTGGAAACCTTAAGCCTAATGTAGTTGTTGCTCAAGATGGATCTGGTCAATTCACAACACTCACTGATGCTATTAAAACTGTTCCAAAAAAGAACAAGAGTCCTTATGTGATTTATGTTAAGGCTGGTATCTACAAGGAGTATGTTTCTTTGACCAAGCATCAGACCCATGTCACTATCATCGGAGATGGTCCCACAAAGACCAGGTTCACTGGCAACAAATCCTATAGGGGTGGTCTCCAAACTTATCTCACCTCTACCTTCAGTGTTAATGCCGCCGCCTTCACCGCCAAGGATATCGGGTTCGAAAACACAGCAGGACCTGATGGACATCAAGCAGTGGCACTTCGTGTGACAGCAGATAAGGCAATCTTCTACAATTGTCACATGGATGGTTTCCAAGACACACTCTATACACAATCACAACGCCAATACTACCGTGACTGCCAAGTAACAGGCACCATCGACTTTGTTTTTGGAGATGCATTTGGTGTGTTCCAAAACTGCAAGCTTGTGGTGAGGAAGCCAAATATTAACCAAAACTGCATTATAACAGCCGGAGGTAGAAACAAAGTTGACAGCCTTAGCGCTTTGGTTTTCCAAGGTTGCCAATTCACTGGTGAACCATCTCTAAAAGCTTTGCCTGGGAAAATATCATTCCTTGGAAGACCATGGAGGAATTTCTCTAAGGTGGTAATTATGGATTCTGATATTGATGATATCTTCAACCCTGAAGGTTACATGCCATGGGCAGGAAGTGCATTTGAGAGCACATGTACCTATTATGAGTACAATAACAAGGGTCTTGGTGCTGATACAAGTAAGAGGGTTAAATGGCCTGGTGTTAAGGTTATTACACCAGTTGAAGCTGCAAATTTCTATCCAGGAAAGTTCTTTGAGATCGCTAATGTAACTCAACGTGATAGTTGGATTGCCACTTCTGGGGTACCTTATGCCTTTGGCCCTTTCCCAATGACGCCGCTCCCAAATCTTCCCATCAAACAGTTTAATTAA 1767 0.4403 MAGNQEGKKKMAVLGVSAVLLVAMVACVAVGLTRGGEGGEEEGKSIAKNQKNVEIVCQAAEFKETCHKSLAKVSEDDTDLKGLIIAAFNATAIELSNQISNSSLYNELAKDNMTKQAMDVCKEVLGYAVDDVHKTVHTLDRFDLSKLNEYAYDLKVWLTGTLSHQYTCLDAFENTTTNAGQTMTKVLNTSLELSNNAIDIVNGLSHLFQGLNLTSFTTSVNSNRRLLSTVDDDGFPSWVTEGQRHLLQTPGLGNLKPNVVVAQDGSGQFTTLTDAIKTVPKKNKSPYVIYVKAGIYKEYVSLTKHQTHVTIIGDGPTKTRFTGNKSYRGGLQTYLTSTFSVNAAAFTAKDIGFENTAGPDGHQAVALRVTADKAIFYNCHMDGFQDTLYTQSQRQYYRDCQVTGTIDFVFGDAFGVFQNCKLVVRKPNINQNCIITAGGRNKVDSLSALVFQGCQFTGEPSLKALPGKISFLGRPWRNFSKVVIMDSDIDDIFNPEGYMPWAGSAFESTCTYYEYNNKGLGADTSKRVKWPGVKVITPVEAANFYPGKFFEIANVTQRDSWIATSGVPYAFGPFPMTPLPNLPIKQFN 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1559 588 SUPERFAMILY Pectin lyase-like 256 570 IPR011050 -
Lal14g1559 588 Pfam Plant invertase/pectin methylesterase inhibitor 53 200 IPR006501 GO:0004857
Lal14g1559 588 PANTHER PECTINESTERASE 5 576 - -
Lal14g1559 588 Gene3D Invertase/pectin methylesterase inhibitor family protein 47 205 IPR035513 -
Lal14g1559 588 CDD PMEI-like_3 56 205 - -
Lal14g1559 588 ProSitePatterns Pectinesterase signature 1. 283 302 IPR018040 -
Lal14g1559 588 PANTHER PECTINESTERASE 5 576 - -
Lal14g1559 588 ProSitePatterns Pectinesterase signature 2. 402 411 IPR033131 -
Lal14g1559 588 SMART PMEI_2 48 200 IPR006501 GO:0004857
Lal14g1559 588 TIGRFAM PME_inhib: pectinesterase inhibitor domain 47 204 IPR006501 GO:0004857
Lal14g1559 588 Pfam Pectinesterase 258 550 IPR000070 GO:0030599|GO:0042545
Lal14g1559 588 Gene3D - 255 574 IPR012334 -
Lal14g1559 588 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 52 204 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1559 Lal-Chr14 16239920 16241947 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g1559 8 569 Carbohydrate Esterase AT5G49180 44.737 7.62e-175 506
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1559 K01051 - gmx:100800194 790.415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1559 14 16239920 16241947 Lal14g1559 14 16239920 16241947 ECH
Lal14g1559 14 16239920 16241947 Lal7g0955 7 15890600 15892676 LSH